RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF19P17023 458 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 RAB4AP20338 218 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 PTBP1P26599 531 aaKnown RBP eCLIP3.67□□□□□ -1.82
HERC1-213ENST00000561359 RPL27AP46776 148 aaKnown RBP3.67□□□□□ -1.82
HERC1-213ENST00000561359 LINC00315P59091 139 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 MS4A2Q01362 244 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 BTN1A1Q13410 526 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 TPBGQ13641 420 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 SPSB3Q6PJ21 355 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 TEX261Q6UWH6 196 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 LHFPL3Q86UP9 236 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 COMMD7Q86VX2 200 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 SNX29P2Q8IUI4 249 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 HS3ST5Q8IZT8 346 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 FAM24BQ8N5W8 94 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 GDPD1Q8N9F7 314 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.67□□□□□ -1.82
HERC1-213ENST00000561359 OR5AK2Q8NH90 309 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 PTX4Q96A99 478 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 YIPF6Q96EC8 236 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 BSCL2Q96G97 398 aaPredicted RBP3.67□□□□□ -1.82
HERC1-213ENST00000561359 MRPL48Q96GC5 212 aaKnown RBP3.67□□□□□ -1.82
HERC1-213ENST00000561359 HYLS1Q96M11 299 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 PDCD1LG2Q9BQ51 273 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 TMEM70Q9BUB7 260 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 C1QTNF4Q9BXJ3 329 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 MS4A6AQ9H2W1 248 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 MAGIXQ9H6Y5 334 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 Q9N2K0 584 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 TMEM138Q9NPI0 162 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 BIN3Q9NQY0 253 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 U3KQ87 197 aa3.67□□□□□ -1.82
HERC1-213ENST00000561359 TRAV14DV4A0A0A6YYC5 116 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 DAPL1A0PJW8 107 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 SMIM9A6NGZ8 99 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 AQP12BA6NM10 295 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 TMEM212A6NML5 194 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 E7EUB6 86 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 ST8SIA3O43173 380 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 IFNA7P01567 189 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 CD5P06127 495 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 CD2P06729 351 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 GNAO1P09471 354 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 DNAH10OSP0CZ25 163 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 MGMTP16455 207 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 CRHBPP24387 322 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 BDKRB2P30411 391 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 NUP62P37198 522 aaPredicted RBP3.66□□□□□ -1.82
HERC1-213ENST00000561359 RPL35P42766 123 aaKnown RBP3.66□□□□□ -1.82
HERC1-213ENST00000561359 PCP4P48539 62 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 OR2B8PP59922 312 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 NUTF2P61970 127 aaKnown RBP3.66□□□□□ -1.82
HERC1-213ENST00000561359 COTL1Q14019 142 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 IRF3Q14653 427 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 AARDQ4LEZ3 155 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 LBHQ53QV2 105 aaPredicted RBP3.66□□□□□ -1.82
HERC1-213ENST00000561359 FAM90A2PQ658T7 463 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 GLIPR1L1Q6UWM5 242 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 MOB1BQ7L9L4 216 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 LRRTM1Q86UE6 522 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 AQP12AQ8IXF9 295 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 UBAC2Q8NBM4 344 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 DUSP18Q8NEJ0 188 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 OR6M1Q8NGM8 313 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 MCFD2Q8NI22 146 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 OSR1Q8TAX0 266 aaPredicted RBP3.66□□□□□ -1.82
HERC1-213ENST00000561359 CENPNQ96H22 339 aaPredicted RBP3.66□□□□□ -1.82
HERC1-213ENST00000561359 ZNF414Q96IQ9 312 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 C4orf36Q96KX1 117 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 NEDD4LQ96PU5 975 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 TCEAL7Q9BRU2 100 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 FAAP24Q9BTP7 215 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 MND1Q9BWT6 205 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 OR2D2Q9H210 308 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 MCUBQ9NWR8 336 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 SDHAF2Q9NX18 166 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 BABAM2Q9NXR7 383 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 THYN1Q9P016 225 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 HSF4Q9ULV5 492 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 CHTOPQ9Y3Y2 248 aaKnown RBP3.66□□□□□ -1.82
HERC1-213ENST00000561359 PUS1Q9Y606 427 aaKnown RBP eCLIP3.66□□□□□ -1.82
HERC1-213ENST00000561359 RFNGQ9Y644 331 aa3.66□□□□□ -1.82
HERC1-213ENST00000561359 IGHV3-21A0A0B4J1V1 117 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 TRAV2A0A0B4J234 112 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 F5H768 121 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 H0YIZ8 118 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 RAB27BO00194 218 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 CYB5BO43169 146 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 SNAPC5O75971 98 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 S100A9P06702 114 aaKnown RBP3.65□□□□□ -1.83
HERC1-213ENST00000561359 ZNF688P0C7X2 276 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 ZNF735P0CB33 412 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 GNRHRP30968 328 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 FGF9P31371 208 aaPredicted RBP3.65□□□□□ -1.83
HERC1-213ENST00000561359 AKR1D1P51857 326 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 TAS2R60P59551 318 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 EFNB1P98172 346 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 ASAH1Q13510 395 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 KLK9Q2XQG4 91 aa3.65□□□□□ -1.83
HERC1-213ENST00000561359 TMEM69Q5SWH9 247 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms