RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 MANBALQ9NQG1 85 aa5.41□□□□□ -1.54
SPG11-224ENST00000561268 TPSG1Q9NRR2 321 aa5.41□□□□□ -1.54
SPG11-224ENST00000561268 AURKAIP1Q9NWT8 199 aaPredicted RBP5.41□□□□□ -1.54
SPG11-224ENST00000561268 PRR13Q9NZ81 148 aa5.41□□□□□ -1.54
SPG11-224ENST00000561268 KCNIP1Q9NZI2 227 aa5.41□□□□□ -1.54
SPG11-224ENST00000561268 IGKV1-6A0A0C4DH72 117 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 SMCO3A2RU48 225 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 PSMB11A5LHX3 300 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 FAM24AA6NFZ4 105 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 SH2D7A6NKC9 451 aaPredicted RBP5.4□□□□□ -1.54
SPG11-224ENST00000561268 ITGB1BP1O14713 200 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 HMGB3O15347 200 aaKnown RBP5.4□□□□□ -1.54
SPG11-224ENST00000561268 SSSCA1O60232 199 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 YPEL1O60688 119 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 MPDU1O75352 247 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 IFNA10P01566 189 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 IGHV3-7P01780 117 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 P0C879 139 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 IL3RAP26951 378 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 RPL35P42766 123 aaKnown RBP5.4□□□□□ -1.54
SPG11-224ENST00000561268 ZNF134P52741 427 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 CRIP2P52943 208 aaPredicted RBP5.4□□□□□ -1.54
SPG11-224ENST00000561268 POLR2GP62487 172 aaKnown RBP eCLIP5.4□□□□□ -1.54
SPG11-224ENST00000561268 FABP9Q0Z7S8 132 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 ICAM4Q14773 271 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 ELOBQ15370 118 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 VWC2Q2TAL6 325 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 OXLD1Q5BKU9 147 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 C19orf54Q5BKX5 351 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 IGSF11Q5DX21 431 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 CT45A1Q5HYN5 189 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 COA6Q5JTJ3 125 aaKnown RBP5.4□□□□□ -1.54
SPG11-224ENST00000561268 TMEM14EPQ6UXP3 125 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 TMEM182Q6ZP80 229 aaPredicted RBP5.4□□□□□ -1.54
SPG11-224ENST00000561268 CYP2G1PQ6ZSU1 146 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 ZNF833PQ6ZTB9 187 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 SSX9Q7RTT3 188 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 ZNF429Q86V71 674 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 OR10X1Q8NGY0 326 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 CT45A3Q8NHU0 189 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 SCGB1C1Q8TD33 95 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 ANAPC16Q96DE5 110 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 YPEL2Q96QA6 119 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 IMMP2LQ96T52 175 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 PYGO2Q9BRQ0 406 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 SMIM3Q9BZL3 60 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 SH3BGRL3Q9H299 93 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 IFI27L2Q9H2X8 130 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 HSPB7Q9UBY9 170 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 VAX2Q9UIW0 290 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 FBXO7Q9Y3I1 522 aa5.4□□□□□ -1.54
SPG11-224ENST00000561268 COL7A1Q02388 2944 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 IGHV3-43A0A0B4J1X8 118 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 IGKV1D-13A0A0B4J2D9 117 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 A0A1W2PPE3 182 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 AGPAT2O15120 278 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 RBFOX2O43251 390 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPG11-224ENST00000561268 SPINT2O43291 252 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 NDUFA3O95167 84 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 TMEM50AO95807 157 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 MOSP00540 346 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 IGHG4P01861 327 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 IGF1P05019 195 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 FABP1P07148 127 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 SCTP09683 121 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 IGHV3-43DP0DP04 118 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 IGKV1-13P0DP09 117 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 PPP1CCP36873 323 aaKnown RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 GPR12P47775 334 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 THBS3P49746 956 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 ATP5IP56385 69 aaPredicted RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 UBE2KP61086 200 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 DLK1P80370 383 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 CATR1Q13166 79 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 FHL3Q13643 280 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 LTC4SQ16873 150 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 MORN2Q502X0 79 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 TMEM41BQ5BJD5 291 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 ARSJQ5FYB0 599 aaPredicted RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 CXorf66Q5JRM2 361 aaPredicted RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 ZNF66Q6ZN08 573 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 FAM24BQ8N5W8 94 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 ZNF645Q8N7E2 425 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 OR2T10Q8NGZ9 312 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 OR1L1Q8NH94 360 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 UBALD1Q8TB05 177 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 RNASEH2CQ8TDP1 164 aaKnown RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 NEK7Q8TDX7 302 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 NOL4LQ96MY1 436 aaPredicted RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 HSD17B10Q99714 261 aaKnown RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 ABHD14AQ9BUJ0 271 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 WDR61Q9GZS3 305 aaKnown RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 SDF2L1Q9HCN8 221 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 KCNIP2Q9NS61 270 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 GAR1Q9NY12 217 aaKnown RBP5.39□□□□□ -1.55
SPG11-224ENST00000561268 NAT8Q9UHE5 227 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 GAB2Q9UQC2 676 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 ARL2-SNX15V9GYD0 113 aa5.39□□□□□ -1.55
SPG11-224ENST00000561268 DNAH9Q9NYC9 4486 aa5.38□□□□□ -1.55
SPG11-224ENST00000561268 TRAV9-1A0A075B6T8 112 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms