RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 UPK1BO75841 260 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 IAPPP10997 89 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 SLC25A6P12236 298 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 HTR2BP41595 481 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 ASAH1Q13510 395 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 ZNF846Q147U1 533 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 C4orf46Q504U0 113 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 SPSB3Q6PJ21 355 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 SLC24A4Q8NFF2 622 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 DTD1Q8TEA8 209 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 WDR89Q96FK6 387 aaPredicted RBP10.47□□□□□ -0.73
TPM1-230ENST00000561266 TXN2Q99757 166 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 MAGT1Q9H0U3 335 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 ZMAT5Q9UDW3 170 aaKnown RBP10.47□□□□□ -0.73
TPM1-230ENST00000561266 TMED3Q9Y3Q3 217 aa10.47□□□□□ -0.73
TPM1-230ENST00000561266 C15orf62A8K5M9 175 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 NDUFA4O00483 81 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 NPY1RP25929 384 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 OPRK1P41145 380 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 SUB1P53999 127 aaKnown RBP eCLIP10.46□□□□□ -0.73
TPM1-230ENST00000561266 PRSS54Q6PEW0 395 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 BTNL8Q6UX41 500 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 TMEM61Q8N0U2 210 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 OR10C1Q96KK4 312 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 C20orf24Q9BUV8 137 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 WDR12Q9GZL7 423 aaKnown RBP10.46□□□□□ -0.73
TPM1-230ENST00000561266 NUDT15Q9NV35 164 aa10.46□□□□□ -0.73
TPM1-230ENST00000561266 IGHV3-49A0A0A0MS15 119 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 GNG7O60262 68 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 IGKV1-17P01599 117 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 TIGITQ495A1 244 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 TOMM20LQ6UXN7 152 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 DUSP18Q8NEJ0 188 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 OR4D5Q8NGN0 318 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 OR4X1Q8NH49 305 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 MITD1Q8WV92 249 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 ASCL2Q99929 193 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 B9D2Q9BPU9 175 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 ZFAND3Q9H8U3 227 aa10.45□□□□□ -0.74
TPM1-230ENST00000561266 CORTO00230 105 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 CCSO14618 274 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 NUPL2O15504 423 aaKnown RBP10.44□□□□□ -0.74
TPM1-230ENST00000561266 CLN5O75503 358 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 IFNA10P01566 189 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 APOHP02749 345 aaPredicted RBP10.44□□□□□ -0.74
TPM1-230ENST00000561266 CD7P09564 240 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 H2AFB2P0C5Z0 115 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 ELLP55199 621 aaPredicted RBP10.44□□□□□ -0.74
TPM1-230ENST00000561266 ID3Q02535 119 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 LCN12Q6JVE5 192 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 LILRB2Q8N423 598 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 DYNLRB2Q8TF09 96 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 WFDC10AQ9H1F0 79 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 HIPK2Q9H2X6 1198 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 TECRQ9NZ01 308 aaKnown RBP10.44□□□□□ -0.74
TPM1-230ENST00000561266 MRPL27Q9P0M9 148 aaKnown RBP10.44□□□□□ -0.74
TPM1-230ENST00000561266 UFC1Q9Y3C8 167 aa10.44□□□□□ -0.74
TPM1-230ENST00000561266 HUWE1Q7Z6Z7 4374 aaKnown RBP10.44□□□□□ -0.74
TPM1-230ENST00000561266 IGHV3OR16-13A0A075B7E8 117 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 IGHV3-74A0A0B4J1X5 117 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 FAM240BA0A1B0GVZ2 78 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 SYNGR2O43760 224 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 SCAF4O95104 1147 aaKnown RBP10.43□□□□□ -0.74
TPM1-230ENST00000561266 IGLC1P0CG04 106 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 NPBWR1P48145 328 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 RND2P52198 227 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 POLR2GP62487 172 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM1-230ENST00000561266 OR2K2Q8NGT1 345 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 COQ8AQ8NI60 647 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 RNASEH2CQ8TDP1 164 aaKnown RBP10.43□□□□□ -0.74
TPM1-230ENST00000561266 NPIPB3Q92617 1050 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 PALMDQ9NP74 551 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 DAZ1Q9NQZ3 744 aaKnown RBP10.43□□□□□ -0.74
TPM1-230ENST00000561266 GAR1Q9NY12 217 aaKnown RBP10.43□□□□□ -0.74
TPM1-230ENST00000561266 PUS1Q9Y606 427 aaKnown RBP eCLIP10.43□□□□□ -0.74
TPM1-230ENST00000561266 SMAD5-AS1Q9Y6J3 95 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 U3KQ87 197 aa10.43□□□□□ -0.74
TPM1-230ENST00000561266 FAM90A26D6RGX4 464 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 PRSS46E5RG02 174 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 K7EMT4 169 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 WRBO00258 174 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 CHEK1O14757 476 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 YIF1AO95070 293 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 FRMD6-AS1P0C7T7 363 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 IGHV4-30-4P0DP06 118 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 PAX9P55771 341 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 RELQ04864 619 aaPredicted RBP10.42□□□□□ -0.74
TPM1-230ENST00000561266 CD69Q07108 199 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 GUCA2BQ16661 112 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 NRARPQ7Z6K4 114 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 SBSPONQ8IVN8 264 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 TMEM116Q8NCL8 245 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 ZNF431Q8TF32 576 aaPredicted RBP10.42□□□□□ -0.74
TPM1-230ENST00000561266 C19orf73Q9NVV2 129 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 SMPXQ9UHP9 88 aa10.42□□□□□ -0.74
TPM1-230ENST00000561266 IGKV1D-37A0A075B6S9 117 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 IGHV7-4-1A0A0J9YVY3 117 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 H3BP45 60 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 CCNKO75909 580 aa10.41□□□□□ -0.74
TPM1-230ENST00000561266 GAMTQ14353 236 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms