RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 FAAP20Q6NZ36 180 aa19.8■□□□□ 0.76
SNRPA1-215ENST00000561187 ARRDC1Q8N5I2 433 aa19.8■□□□□ 0.76
SNRPA1-215ENST00000561187 STXBP6Q8NFX7 210 aa19.8■□□□□ 0.76
SNRPA1-215ENST00000561187 C11orf45Q8TAV5 145 aa19.8■□□□□ 0.76
SNRPA1-215ENST00000561187 DNAH10Q8IVF4 4471 aa19.8■□□□□ 0.76
SNRPA1-215ENST00000561187 MARCH1Q8TCQ1 289 aa19.79■□□□□ 0.76
SNRPA1-215ENST00000561187 AP3S1Q92572 193 aa19.79■□□□□ 0.76
SNRPA1-215ENST00000561187 ABHD1Q96SE0 405 aa19.79■□□□□ 0.76
SNRPA1-215ENST00000561187 MTFP1Q9UDX5 166 aa19.79■□□□□ 0.76
SNRPA1-215ENST00000561187 SUB1P53999 127 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNRPA1-215ENST00000561187 RBMS2Q15434 407 aaKnown RBP19.78■□□□□ 0.76
SNRPA1-215ENST00000561187 CCDC71LQ8N9Z2 235 aa19.78■□□□□ 0.76
SNRPA1-215ENST00000561187 RRNAD1Q96FB5 475 aaKnown RBP19.78■□□□□ 0.76
SNRPA1-215ENST00000561187 AGRNO00468 2067 aa19.78■□□□□ 0.76
SNRPA1-215ENST00000561187 ATG12O94817 140 aa19.77■□□□□ 0.76
SNRPA1-215ENST00000561187 TMEM187Q14656 261 aa19.77■□□□□ 0.76
SNRPA1-215ENST00000561187 CTF1Q16619 201 aa19.77■□□□□ 0.76
SNRPA1-215ENST00000561187 TIGITQ495A1 244 aa19.77■□□□□ 0.76
SNRPA1-215ENST00000561187 C11orf68Q9H3H3 251 aaKnown RBP19.77■□□□□ 0.76
SNRPA1-215ENST00000561187 CORTO00230 105 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 CLN5O75503 358 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 RAB3DO95716 219 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 NPPCP23582 126 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 Q6ZRM9 215 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 STHQ8IWL8 128 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 ZFAND1Q8TCF1 268 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 TMEM230Q96A57 120 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 METTL26Q96S19 204 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 TMEM231Q9H6L2 316 aa19.76■□□□□ 0.75
SNRPA1-215ENST00000561187 KNCNA6PVL3 124 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 INS-IGF2F8WCM5 200 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 NXPH3O95157 252 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 GABARAPO95166 117 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 CD5P06127 495 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 OR5AC1P0C628 307 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 ZNF688P0C7X2 276 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 SMIM18P0DKX4 95 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 ZNF182P17025 639 aaPredicted RBP19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 UCP1P25874 307 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 GPR107Q5VW38 600 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 TERB2Q8NHR7 220 aa19.75■□□□□ 0.75
SNRPA1-215ENST00000561187 TBPP20226 339 aa19.74■□□□□ 0.75
SNRPA1-215ENST00000561187 P2RY1P47900 373 aa19.74■□□□□ 0.75
SNRPA1-215ENST00000561187 TAS2R19P59542 299 aa19.74■□□□□ 0.75
SNRPA1-215ENST00000561187 PVRIGQ6DKI7 326 aa19.74■□□□□ 0.75
SNRPA1-215ENST00000561187 STEAP1BQ6NZ63 245 aa19.74■□□□□ 0.75
SNRPA1-215ENST00000561187 TMEM229BQ8NBD8 167 aa19.74■□□□□ 0.75
SNRPA1-215ENST00000561187 LHFPL5Q8TAF8 219 aa19.74■□□□□ 0.75
SNRPA1-215ENST00000561187 MFFQ9GZY8 342 aa19.74■□□□□ 0.75
SNRPA1-215ENST00000561187 CD74P04233 296 aa19.73■□□□□ 0.75
SNRPA1-215ENST00000561187 IFNA4P05014 189 aa19.73■□□□□ 0.75
SNRPA1-215ENST00000561187 OR4X1Q8NH49 305 aa19.73■□□□□ 0.75
SNRPA1-215ENST00000561187 VPS13DQ5THJ4 4388 aa19.73■□□□□ 0.75
SNRPA1-215ENST00000561187 RGS5O15539 181 aa19.72■□□□□ 0.75
SNRPA1-215ENST00000561187 IGKV1-17P01599 117 aa19.72■□□□□ 0.75
SNRPA1-215ENST00000561187 MIXL1Q9H2W2 232 aa19.72■□□□□ 0.75
SNRPA1-215ENST00000561187 C14orf166Q9Y224 244 aaKnown RBP19.72■□□□□ 0.75
SNRPA1-215ENST00000561187 TRAV2A0A0B4J234 112 aa19.71■□□□□ 0.75
SNRPA1-215ENST00000561187 TEX13DA0A0J9YY54 714 aaPredicted RBP19.71■□□□□ 0.75
SNRPA1-215ENST00000561187 A0A1W2PS18 150 aa19.71■□□□□ 0.75
SNRPA1-215ENST00000561187 K7EQG2 157 aa19.71■□□□□ 0.75
SNRPA1-215ENST00000561187 C4BPBP20851 252 aa19.71■□□□□ 0.75
SNRPA1-215ENST00000561187 LGALS9CQ6DKI2 356 aa19.71■□□□□ 0.75
SNRPA1-215ENST00000561187 TMEM222Q9H0R3 208 aa19.71■□□□□ 0.75
SNRPA1-215ENST00000561187 CACNG5Q9UF02 275 aa19.71■□□□□ 0.75
SNRPA1-215ENST00000561187 SCGB2A1O75556 95 aa19.7■□□□□ 0.74
SNRPA1-215ENST00000561187 CRYBB3P26998 211 aa19.7■□□□□ 0.74
SNRPA1-215ENST00000561187 RND2P52198 227 aa19.7■□□□□ 0.74
SNRPA1-215ENST00000561187 MEF2DQ14814 521 aa19.7■□□□□ 0.74
SNRPA1-215ENST00000561187 NARS2Q96I59 477 aaKnown RBP19.7■□□□□ 0.74
SNRPA1-215ENST00000561187 HEYLQ9NQ87 328 aaPredicted RBP19.7■□□□□ 0.74
SNRPA1-215ENST00000561187 CLEC5AQ9NY25 188 aa19.7■□□□□ 0.74
SNRPA1-215ENST00000561187 GIG44P09565 113 aaPredicted RBP19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 SPCS3P61009 180 aa19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 BSXQ3C1V8 233 aa19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 ACTL10Q5JWF8 245 aa19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 TRPT1Q86TN4 253 aaKnown RBP19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 Q8NAQ8 132 aa19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 RTBDNQ9BSG5 229 aaPredicted RBP19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 NAA60Q9H7X0 242 aa19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 PRR13Q9NZ81 148 aa19.69■□□□□ 0.74
SNRPA1-215ENST00000561187 IGHV4-28A0A0C4DH34 117 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 CEBPZOSA8MTT3 80 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 GABARAPH6UMI1 98 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 RPL5P46777 297 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 PRR20EP86478 221 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 PRR20CP86479 221 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 PRR20DP86480 221 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 PRR20BP86481 221 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 PRR20AP86496 221 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 TMEM268Q5VZI3 342 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 C2CD4CQ8TF44 421 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 GLYATL2Q8WU03 294 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 RBPMSQ93062 196 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 GPR146Q96CH1 333 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 DNAH6Q9C0G6 4158 aa19.68■□□□□ 0.74
SNRPA1-215ENST00000561187 RPS10-NUDT3A0A1W2PQS6 291 aa19.67■□□□□ 0.74
SNRPA1-215ENST00000561187 CTDSP2O14595 271 aa19.67■□□□□ 0.74
SNRPA1-215ENST00000561187 HTR2BP41595 481 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms