RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 EGR2P11161 476 aaPredicted RBP13.53□□□□□ -0.24
HDDC3-206ENST00000561036 PPT1P50897 306 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 RND2P52198 227 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 NDPQ00604 133 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 KLK9Q2XQG4 91 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 KHDC3LQ587J8 217 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 ASPHD1Q5U4P2 390 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 RBMS3Q6XE24 437 aaKnown RBP13.53□□□□□ -0.24
HDDC3-206ENST00000561036 C16orf82Q7Z2V1 217 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 SGMS2Q8NHU3 365 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 RNF2Q99496 336 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 SEC11CQ9BY50 192 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 TMEM231Q9H6L2 316 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 KLK9Q9UKQ9 250 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 CARHSP1Q9Y2V2 147 aaKnown RBP13.53□□□□□ -0.24
HDDC3-206ENST00000561036 PTPN13Q12923 2485 aa13.53□□□□□ -0.24
HDDC3-206ENST00000561036 IGKV1D-37A0A075B6S9 117 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 A6NDX4 124 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 M0QZK8 103 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 NDUFS6O75380 124 aaKnown RBP13.52□□□□□ -0.25
HDDC3-206ENST00000561036 C9orf139Q6ZV77 190 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 CCDC28AQ8IWP9 274 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 MAPK1IP1LQ8NDC0 245 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 OR4X1Q8NH49 305 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 FOXC2Q99958 501 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 FAM103A1Q9BTL3 118 aaKnown RBP13.52□□□□□ -0.25
HDDC3-206ENST00000561036 PLXNB1O43157 2135 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 DOPEY2Q9Y3R5 2298 aa13.52□□□□□ -0.25
HDDC3-206ENST00000561036 IGLV11-55A0A075B6I3 123 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 LOC102723971A0A1B0GUV8 181 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 ZFP92A6NM28 416 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 C9JQL5 133 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 F8W036 122 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 HSPB1P04792 205 aaKnown RBP13.51□□□□□ -0.25
HDDC3-206ENST00000561036 SFTA3P0C7M3 94 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 HIST1H1BP16401 226 aaKnown RBP13.51□□□□□ -0.25
HDDC3-206ENST00000561036 PSMB3P49720 205 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 GCSAMLQ5JQS6 135 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 C19orf35Q6ZS72 473 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 TEX29Q8N6K0 151 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 NANPQ8TBE9 248 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 HSPB9Q9BQS6 159 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 SLC35B3Q9H1N7 401 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 MANBALQ9NQG1 85 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 TNFRSF19Q9NS68 423 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 THYN1Q9P016 225 aa13.51□□□□□ -0.25
HDDC3-206ENST00000561036 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.51□□□□□ -0.25
HDDC3-206ENST00000561036 K7EIM0 57 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 STAG3L2P0CL84 134 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 STAG3L3P0CL85 134 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 BCL2P10415 239 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 CRIP2P52943 208 aaPredicted RBP13.5□□□□□ -0.25
HDDC3-206ENST00000561036 FGF8P55075 233 aaPredicted RBP13.5□□□□□ -0.25
HDDC3-206ENST00000561036 ICAM4Q14773 271 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 HAGHQ16775 308 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 AKIRIN2Q53H80 203 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 SLC35E3Q7Z769 313 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 OR1L4Q8NGR5 311 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 FAM110DQ8TAY7 271 aaPredicted RBP13.5□□□□□ -0.25
HDDC3-206ENST00000561036 GATAD1Q8WUU5 269 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 ZNF48Q96MX3 618 aaPredicted RBP13.5□□□□□ -0.25
HDDC3-206ENST00000561036 MRPL36Q9P0J6 103 aaKnown RBP13.5□□□□□ -0.25
HDDC3-206ENST00000561036 GNG13Q9P2W3 67 aa13.5□□□□□ -0.25
HDDC3-206ENST00000561036 CR1P17927 2039 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 CRYBG3Q68DQ2 2970 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 TACC2O95359 2948 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 H3BUX3 64 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 CXorf1O96002 111 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 FABP1P07148 127 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 OR5G3P0C626 314 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 TMEM219Q86XT9 240 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 FANCD2OSQ96PS1 177 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 PFDN5Q99471 154 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 RARRES2Q99969 163 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 MRPL32Q9BYC8 188 aaKnown RBP13.49□□□□□ -0.25
HDDC3-206ENST00000561036 VAX2Q9UIW0 290 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 FUT9Q9Y231 359 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 TENM4Q6N022 2769 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 NAV3Q8IVL0 2385 aa13.49□□□□□ -0.25
HDDC3-206ENST00000561036 IGHV3-48P01763 117 aa13.48□□□□□ -0.25
HDDC3-206ENST00000561036 APOC3P02656 99 aa13.48□□□□□ -0.25
HDDC3-206ENST00000561036 AMY1AP04745 511 aa13.48□□□□□ -0.25
HDDC3-206ENST00000561036 ADCYAP1P18509 176 aa13.48□□□□□ -0.25
HDDC3-206ENST00000561036 SVBPQ8N300 66 aa13.48□□□□□ -0.25
HDDC3-206ENST00000561036 DNAJC4Q9NNZ3 241 aa13.48□□□□□ -0.25
HDDC3-206ENST00000561036 SOX21Q9Y651 276 aaPredicted RBP13.48□□□□□ -0.25
HDDC3-206ENST00000561036 PRRC2AP48634 2157 aaKnown RBP13.48□□□□□ -0.25
HDDC3-206ENST00000561036 NAV2Q8IVL1 2488 aa13.48□□□□□ -0.25
HDDC3-206ENST00000561036 TRAV30A0A087WSZ9 112 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 PSMB11A5LHX3 300 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 ATP6V0E1O15342 81 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 HMGB3O15347 200 aaKnown RBP13.47□□□□□ -0.25
HDDC3-206ENST00000561036 CLN5O75503 358 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 SRP19P09132 144 aaKnown RBP13.47□□□□□ -0.25
HDDC3-206ENST00000561036 NPBWR1P48145 328 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 FAM78BQ5VT40 261 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 UNQ5815/PRO19632Q6UWF5 114 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 WFDC11Q8NEX6 87 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 OR5R1Q8NH85 324 aa13.47□□□□□ -0.25
HDDC3-206ENST00000561036 SEPSECSQ9HD40 501 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms