RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 SEPSECSQ9HD40 501 aaKnown RBP10.23□□□□□ -0.77
SNX1-211ENST00000560829 SVEP1Q4LDE5 3571 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 FAM208BQ5VWN6 2430 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 NPIPB5A8MRT5 1133 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 I3L2K1 104 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 MT-CO2P00403 227 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 NPBWR1P48145 328 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 RND2P52198 227 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 NDPQ00604 133 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 LOXL1Q08397 574 aaPredicted RBP10.22□□□□□ -0.77
SNX1-211ENST00000560829 BTN1A1Q13410 526 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 RUSC1-AS1Q66K80 236 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 CYB561D1Q8N8Q1 229 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 LINC01356Q8N9X3 169 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 C22orf15Q8WYQ4 148 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 C7orf69Q9H7B7 122 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 HIF1ANQ9NWT6 349 aa10.22□□□□□ -0.77
SNX1-211ENST00000560829 IGHV7-81A0A0B4J1V7 117 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 PSMB11A5LHX3 300 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 CXorf1O96002 111 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 OR5G3P0C626 314 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 MEF2BQ02080 365 aaPredicted RBP10.21□□□□□ -0.77
SNX1-211ENST00000560829 ASPHD1Q5U4P2 390 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 TTC9CQ8N5M4 171 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 GATAD1Q8WUU5 269 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 TRGV9Q99603 122 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 FUT9Q9Y231 359 aa10.21□□□□□ -0.77
SNX1-211ENST00000560829 DNASE2O00115 360 aaPredicted RBP10.21□□□□□ -0.78
SNX1-211ENST00000560829 FBP1P09467 338 aa10.21□□□□□ -0.78
SNX1-211ENST00000560829 IGHV4-38-2P0DP08 117 aa10.21□□□□□ -0.78
SNX1-211ENST00000560829 GATA2P23769 480 aaPredicted RBP10.21□□□□□ -0.78
SNX1-211ENST00000560829 CD81P60033 236 aa10.21□□□□□ -0.78
SNX1-211ENST00000560829 SPNS3Q6ZMD2 512 aa10.21□□□□□ -0.78
SNX1-211ENST00000560829 NANPQ8TBE9 248 aa10.21□□□□□ -0.78
SNX1-211ENST00000560829 MBD6Q96DN6 1003 aa10.21□□□□□ -0.78
SNX1-211ENST00000560829 FAM103A1Q9BTL3 118 aaKnown RBP10.21□□□□□ -0.78
SNX1-211ENST00000560829 ABCA2Q9BZC7 2435 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 A0A0U1RQK1 487 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 IGHV3-48P01763 117 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 ARL14EPLP0DKL9 152 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 EGR2P11161 476 aaPredicted RBP10.2□□□□□ -0.78
SNX1-211ENST00000560829 FAM78BQ5VT40 261 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 SPATA31B1PQ5VZV4 182 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 FAM90A2PQ658T7 463 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 BRD3OSQ6XYD6 125 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 OR4X1Q8NH49 305 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 PIFOQ8TCI5 191 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 PSMG3-AS1Q96PY0 264 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 RNF2Q99496 336 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 RASL11BQ9BPW5 248 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 MRPL32Q9BYC8 188 aaKnown RBP10.2□□□□□ -0.78
SNX1-211ENST00000560829 CHD6Q8TD26 2715 aa10.2□□□□□ -0.78
SNX1-211ENST00000560829 CRYBG3Q68DQ2 2970 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 IGHV3OR16-10A0A075B7F0 116 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 TMEM250H0YL14 139 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 J3QLI3 93 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 K7EIM0 57 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 ZNF90Q03938 601 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 KLF17Q5JT82 389 aaPredicted RBP10.19□□□□□ -0.78
SNX1-211ENST00000560829 TMEM37Q8WXS4 190 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 TXNDC17Q9BRA2 123 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 TNFRSF19Q9NS68 423 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 SPG11Q96JI7 2443 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 CSMD2Q7Z408 3487 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 IGLV11-55A0A075B6I3 123 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 PAGE4O60829 102 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 KLK9Q2XQG4 91 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 PRSS57Q6UWY2 283 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 MIR17HGQ75NE6 70 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 IQCF2Q8IXL9 164 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 OR1L4Q8NGR5 311 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 RBM14Q96PK6 669 aaKnown RBP10.19□□□□□ -0.78
SNX1-211ENST00000560829 FANCD2OSQ96PS1 177 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 PFDN5Q99471 154 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 DNAJC4Q9NNZ3 241 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 TECRQ9NZ01 308 aaKnown RBP10.19□□□□□ -0.78
SNX1-211ENST00000560829 KLK9Q9UKQ9 250 aa10.19□□□□□ -0.78
SNX1-211ENST00000560829 FAM74A7A6NL05 159 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 AVPP01185 164 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 IGLC1P0CG04 106 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 GCHFRP30047 84 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 FAM74A3Q4VXF1 159 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 AWAT1Q58HT5 328 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 C5orf56Q8N8D9 126 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 SGMS2Q8NHU3 365 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 ARL2-SNX15V9GYD0 113 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 USP9YO00507 2555 aaPredicted RBP10.18□□□□□ -0.78
SNX1-211ENST00000560829 MED13LQ71F56 2210 aa10.18□□□□□ -0.78
SNX1-211ENST00000560829 ELOA3CA0A087WX78 387 aaPredicted RBP10.17□□□□□ -0.78
SNX1-211ENST00000560829 H3BQ15 152 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 CLN5O75503 358 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 TAS2R45P59539 299 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 BPIFB3P59826 476 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 PLP1P60201 277 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 RHEBQ15382 184 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 Q5PR19 223 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 PQLC2Q6ZP29 291 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 SUN5Q8TC36 379 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 ZNF48Q96MX3 618 aaPredicted RBP10.17□□□□□ -0.78
SNX1-211ENST00000560829 HSPB9Q9BQS6 159 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 282.6 ms