RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 C8orf76Q96K31 380 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 C2orf50Q96LR7 162 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 SERPINI1Q99574 410 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 TMEM147Q9BVK8 224 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 REG4Q9BYZ8 158 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 COMMD5Q9GZQ3 224 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 TMEM133Q9H2Q1 129 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 C11orf68Q9H3H3 251 aaKnown RBP0.17□□□□□ -2.38
SPG11-222ENST00000560435 TRABDQ9H4I3 376 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 PARVBQ9HBI1 364 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.17□□□□□ -2.38
SPG11-222ENST00000560435 CKLFQ9UBR5 152 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 FBXO5Q9UKT4 447 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 SLC22A13Q9Y226 551 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 HS3ST2Q9Y278 367 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 MYH11P35749 1972 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 MYOFQ9NZM1 2061 aa0.17□□□□□ -2.38
SPG11-222ENST00000560435 CACNA1BQ00975 2339 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 RP1P56715 2156 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 ARFGEF3Q5TH69 2177 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TTC21AQ8NDW8 1320 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 MYO3BQ8WXR4 1341 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 NCOA1Q15788 1441 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 RIC1Q4ADV7 1423 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 IGKV1D-42A0A075B6H8 117 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TRAV9-1A0A075B6T8 112 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 IGKV2D-26A0A0A0MRZ7 120 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 FAM236DA0A1B0GTK5 79 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 hADV38S2A0JD32 116 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 FUOMA2VDF0 154 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 DPRXA6NFQ7 191 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TMEM212A6NML5 194 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 GEMIN2O14893 280 aaKnown RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 INE1O15225 51 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 FADS1O60427 444 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR1I1O60431 355 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 LYZL6O75951 148 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR2B3O76000 313 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 RPP14O95059 124 aaKnown RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 UBL3O95164 117 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TNNC2P02585 160 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SERPINE1P05121 402 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 C8GP07360 202 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 RBP1P09455 135 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 CTXN2P0C2S0 81 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR4E1P0C645 316 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 BAALC-AS2P0C853 105 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 FAM236CP0DP71 79 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SPI1P17947 270 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 FKBP2P26885 142 aaKnown RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 CDKN2CP42773 168 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 EIF2B2P49770 351 aaKnown RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 CEBPGP53567 150 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 AP3S2P59780 193 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 MYL6P60660 151 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SRSF6Q13247 344 aaKnown RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 ITGB3BPQ13352 177 aaPredicted RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 CDK10Q15131 360 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SURF2Q15527 256 aaPredicted RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 C12orf74Q32Q52 190 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TMEM97Q5BJF2 176 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SPANXN5Q5MJ07 72 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TEX36Q5VZQ5 186 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SPOPLQ6IQ16 392 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 DPPA3Q6W0C5 159 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 AAED1Q7RTV5 226 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 BPIFA4PQ86YQ2 179 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TRAPPC5Q8IUR0 188 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 HIST3H2BBQ8N257 126 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 LINC00311Q8N616 119 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SIGLECL1Q8N7X8 197 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 GDPD1Q8N9F7 314 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 WFDC11Q8NEX6 87 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR11H6Q8NGC7 330 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR52L1Q8NGH7 329 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR5A1Q8NGJ0 315 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR13D1Q8NGV5 346 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR4C6Q8NH72 309 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 MCFD2Q8NI22 146 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 ZNF418Q8TF45 676 aaPredicted RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 CT55Q8WUE5 264 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 CCDC42Q96M95 316 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 ODF3Q96PU9 254 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 ULBP3Q9BZM4 244 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 RNASE7Q9H1E1 156 aaKnown RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 TLNRD1Q9H1K6 362 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SLC39A9Q9NUM3 307 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 NHP2Q9NX24 153 aaKnown RBP0.16□□□□□ -2.38
SPG11-222ENST00000560435 TAS2R4Q9NYW5 299 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TVP23BQ9NYZ1 205 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 IDI2-AS1Q9NZ38 188 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 OR5AC2Q9NZP5 309 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 EPDR1Q9UM22 224 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 ERGIC3Q9Y282 383 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 PRELID3BQ9Y3B1 194 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 SNURFQ9Y675 71 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 TOPBP1Q92547 1522 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 MICAL3Q7RTP6 2002 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 POLEQ07864 2286 aa0.16□□□□□ -2.38
SPG11-222ENST00000560435 EXPH5Q8NEV8 1989 aa0.15□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms