RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 HBG2P69892 147 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 CLINT1Q14677 625 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 BSXQ3C1V8 233 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 RPL7L1Q6DKI1 246 aaKnown RBP8.9□□□□□ -0.98
USP3-218ENST00000560202 OR8G2PQ6IF36 304 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
USP3-218ENST00000560202 C5orf56Q8N8D9 126 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 TMEM170AQ8WVE7 144 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 ZNF48Q96MX3 618 aaPredicted RBP8.9□□□□□ -0.98
USP3-218ENST00000560202 PRDM13Q9H4Q3 707 aa8.9□□□□□ -0.98
USP3-218ENST00000560202 IGHV7-81A0A0B4J1V7 117 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 RNASE2P10153 161 aaKnown RBP8.89□□□□□ -0.99
USP3-218ENST00000560202 ATP5IP56385 69 aaPredicted RBP8.89□□□□□ -0.99
USP3-218ENST00000560202 RAB11AP62491 216 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 RELQ04864 619 aaPredicted RBP8.89□□□□□ -0.99
USP3-218ENST00000560202 C2orf83Q53S99 150 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 Q6YL49 198 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 ETV3LQ6ZN32 361 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 UBAC2Q8NBM4 344 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 OR10P1Q8NGE3 313 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 SSMEM1Q8WWF3 244 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 ARPC1AQ92747 370 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 SRSF8Q9BRL6 282 aaKnown RBP8.89□□□□□ -0.99
USP3-218ENST00000560202 ARV1Q9H2C2 271 aa8.89□□□□□ -0.99
USP3-218ENST00000560202 TET2Q6N021 2002 aaPredicted RBP8.89□□□□□ -0.99
USP3-218ENST00000560202 BORCS7-ASMTA0A0B4J1R7 106 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 M0R036 132 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 SCAF4O95104 1147 aaKnown RBP8.88□□□□□ -0.99
USP3-218ENST00000560202 AMY1AP04745 511 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 REG1AP05451 166 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 APELAP0DMC3 54 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 AREGP15514 252 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 HNF1AP20823 631 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 NDPQ00604 133 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 SLC38A11Q08AI6 406 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 KIAA0141Q14154 515 aaPredicted RBP8.88□□□□□ -0.99
USP3-218ENST00000560202 C16orf82Q7Z2V1 217 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 OR5R1Q8NH85 324 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 RAB24Q969Q5 203 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 PINX1Q96BK5 328 aaKnown RBP8.88□□□□□ -0.99
USP3-218ENST00000560202 SMR3AQ99954 134 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 HSPB9Q9BQS6 159 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 FAM103A1Q9BTL3 118 aaKnown RBP8.88□□□□□ -0.99
USP3-218ENST00000560202 SLC35B3Q9H1N7 401 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 MYO9AB2RTY4 2548 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 BTBD17A6NE02 478 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 SH2D7A6NKC9 451 aaPredicted RBP8.88□□□□□ -0.99
USP3-218ENST00000560202 M0QZK8 103 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 DFFBO76075 338 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 RAB4AP20338 218 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 SUB1P53999 127 aaKnown RBP eCLIP8.88□□□□□ -0.99
USP3-218ENST00000560202 ZNF266Q14584 549 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 GUK1Q16774 197 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 ATP6V1FQ16864 119 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 Q6ZRG5 221 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 ABHD5Q8WTS1 349 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 C14orf144Q96I85 54 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 YPEL4Q96NS1 127 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 P2RX4Q99571 388 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 ATP5SQ99766 215 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 TMEM160Q9NX00 188 aa8.88□□□□□ -0.99
USP3-218ENST00000560202 TNCP24821 2201 aa8.87□□□□□ -0.99
USP3-218ENST00000560202 CSPG4Q6UVK1 2322 aa8.87□□□□□ -0.99
USP3-218ENST00000560202 PRSS46E5RG02 174 aa8.87□□□□□ -0.99
USP3-218ENST00000560202 LY6G6DO95868 133 aa8.87□□□□□ -0.99
USP3-218ENST00000560202 EGR2P11161 476 aaPredicted RBP8.87□□□□□ -0.99
USP3-218ENST00000560202 PYY3Q5JQD4 70 aa8.87□□□□□ -0.99
USP3-218ENST00000560202 ZNF114Q8NC26 417 aa8.87□□□□□ -0.99
USP3-218ENST00000560202 TMUB1Q9BVT8 246 aa8.87□□□□□ -0.99
USP3-218ENST00000560202 FBXO7Q9Y3I1 522 aa8.87□□□□□ -0.99
USP3-218ENST00000560202 ANK3Q12955 4377 aaKnown RBP8.86□□□□□ -0.99
USP3-218ENST00000560202 UMAD1C9J7I0 102 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 HOXA3O43365 443 aaPredicted RBP8.86□□□□□ -0.99
USP3-218ENST00000560202 OR2C1O95371 312 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 CD99P14209 185 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 DDTP30046 118 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 C9orf152Q5JTZ5 239 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 SIGLECL1Q8N7X8 197 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 NOL4LQ96MY1 436 aaPredicted RBP8.86□□□□□ -0.99
USP3-218ENST00000560202 TMEM147Q9BVK8 224 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 TNFRSF19Q9NS68 423 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 VPREB3Q9UKI3 123 aa8.86□□□□□ -0.99
USP3-218ENST00000560202 F11RQ9Y624 299 aaKnown RBP8.86□□□□□ -0.99
USP3-218ENST00000560202 FLNBO75369 2602 aaKnown RBP8.86□□□□□ -0.99
USP3-218ENST00000560202 ZFHX3Q15911 3703 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 PPP1R2P9O14990 202 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 ATP6V0E1O15342 81 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 IFNA5P01569 189 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 VWC2Q2TAL6 325 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 ASPHD1Q5U4P2 390 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 PVRIGQ6DKI7 326 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 C19orf35Q6ZS72 473 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 FAM24BQ8N5W8 94 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 OR1P1Q8NH06 330 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 SGMS2Q8NHU3 365 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 RNASEH2CQ8TDP1 164 aaKnown RBP8.85□□□□□ -0.99
USP3-218ENST00000560202 UBE2L5PA0A1B0GUS4 154 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 LINC01548A6NM66 108 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 NPIPB5A8MRT5 1133 aa8.85□□□□□ -0.99
USP3-218ENST00000560202 B4DEV8 164 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms