RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 BTCP35070 178 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 ELLP55199 621 aaPredicted RBP11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 SRPXP78539 464 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 RBMS2Q15434 407 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 SLC24A4Q8NFF2 622 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 OR1S1Q8NH92 325 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 MARC2Q969Z3 335 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 DAZ1Q9NQZ3 744 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 GAR1Q9NY12 217 aaKnown RBP11.14□□□□□ -0.63
RABGGTA-211ENST00000559850 CORTO00230 105 aa11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 NDUFB6O95139 128 aa11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 TMEM50AO95807 157 aa11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 HOXB5P09067 269 aa11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 HTR2BP41595 481 aa11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 TNFRSF9Q07011 255 aa11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 TOMM20LQ6UXN7 152 aa11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 DEDD2Q8WXF8 326 aa11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 HUWE1Q7Z6Z7 4374 aaKnown RBP11.13□□□□□ -0.63
RABGGTA-211ENST00000559850 NAP1L6A6NFF2 107 aa11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 ANXA7P20073 488 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 NPY1RP25929 384 aa11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 NPBWR1P48145 328 aa11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 CNPY1Q3B7I2 92 aa11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 TIGITQ495A1 244 aa11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 RBPMS2Q6ZRY4 209 aaKnown RBP11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 OR52B4Q8NGK2 314 aa11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 HSPB7Q9UBY9 170 aa11.12□□□□□ -0.63
RABGGTA-211ENST00000559850 IGHV3-66A0A0C4DH42 116 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 A0A1B0GU03 582 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 C9orf170A2RU37 121 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 C15orf62A8K5M9 175 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 A8MZ25 164 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 OR11H12B2RN74 326 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 K7EMT4 169 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 PLA2G10O15496 165 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 CLN5O75503 358 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 APOHP02749 345 aaPredicted RBP11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 IAPPP10997 89 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 HAGHQ16775 308 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 C2orf83Q53S99 150 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 LRTM2Q8N967 370 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 DTD1Q8TEA8 209 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 RNF2Q99496 336 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 RHPN1-AS1Q9BWJ2 59 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 HIPK2Q9H2X6 1198 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 SRD5A3Q9H8P0 318 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 UBQLN2Q9UHD9 624 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 SMPXQ9UHP9 88 aa11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 PUS1Q9Y606 427 aaKnown RBP eCLIP11.11□□□□□ -0.63
RABGGTA-211ENST00000559850 IGKV3-7A0A075B6H7 116 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 RBMY1BA6NDE4 496 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 RBMY1EA6NEQ0 496 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 A6NHS1 94 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 CENPXA8MT69 81 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 CHEK1O14757 476 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 PITX3O75364 302 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 ADAP1O75689 374 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 IFNA10P01566 189 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 RBMY1DP0C7P1 496 aaKnown RBP11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 RND2P52198 227 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 GGNBP1Q5YKI7 109 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 PRSS54Q6PEW0 395 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 TMEM116Q8NCL8 245 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 OR4X1Q8NH49 305 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 OR10C1Q96KK4 312 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 MAGT1Q9H0U3 335 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 ZFAND3Q9H8U3 227 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 RETNQ9HD89 108 aa11.1□□□□□ -0.63
RABGGTA-211ENST00000559850 TENM3Q9P273 2699 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 TRAV14DV4A0A0A6YYC5 116 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 TRAV25A0A0B4J276 109 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 DUXBA0A1W2PPF3 345 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 MPTX1A8MV57 137 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 TFPI2P48307 235 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 UBE2MP61081 183 aaKnown RBP11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 SLC16A13Q7RTY0 426 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 LILRB2Q8N423 598 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 ACY3Q96HD9 319 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 WWC2-AS2Q96NR7 200 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 TM2D3Q9BRN9 247 aa11.09□□□□□ -0.63
RABGGTA-211ENST00000559850 RPS10-NUDT3A0A1W2PQS6 291 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 LYRM1O43325 122 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 IGKV1-17P01599 117 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 OR4E1P0C645 316 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 DHRS2Q13268 280 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 C4orf46Q504U0 113 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 LINC00322Q6ZN03 302 aaPredicted RBP11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 GBGT1Q8N5D6 347 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 RNASEH2CQ8TDP1 164 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 CITED4Q96RK1 184 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 C7orf50Q9BRJ6 194 aaKnown RBP11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
RABGGTA-211ENST00000559850 TSPAN4O14817 238 aa11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 IFNA4P05014 189 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms