RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 PRR20AP86496 221 aa13.68□□□□□ -0.22
CDC42BPB-206ENST00000559790 FAAP20Q6NZ36 180 aa13.68□□□□□ -0.22
CDC42BPB-206ENST00000559790 OR11H2Q8NH07 326 aa13.68□□□□□ -0.22
CDC42BPB-206ENST00000559790 RARRES2Q99969 163 aa13.68□□□□□ -0.22
CDC42BPB-206ENST00000559790 GINS3Q9BRX5 216 aa13.68□□□□□ -0.22
CDC42BPB-206ENST00000559790 EXTL2Q9UBQ6 330 aa13.68□□□□□ -0.22
CDC42BPB-206ENST00000559790 K7EQG2 157 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 DEFB4AO15263 64 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 CA1P00915 261 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 TBPP20226 339 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 C4BPBP20851 252 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 CRYBB3P26998 211 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 NPBWR1P48145 328 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 TRPT1Q86TN4 253 aaKnown RBP13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 DUSP18Q8NEJ0 188 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 MARCH1Q8TCQ1 289 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 DCANP1Q8TF63 244 aa13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 KLK5Q9Y337 293 aaPredicted RBP13.67□□□□□ -0.22
CDC42BPB-206ENST00000559790 FAM25AB3EWG3 89 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 FAM25CB3EWG5 89 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 FAM25GB3EWG6 89 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 CLN5O75503 358 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 LGALS9CQ6DKI2 356 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 TMEM217Q8N7C4 229 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 OR4X1Q8NH49 305 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 TERB2Q8NHR7 220 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 RTBDNQ9BSG5 229 aaPredicted RBP13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 C6orf62Q9GZU0 229 aaPredicted RBP13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 U3KQE9 123 aa13.66□□□□□ -0.22
CDC42BPB-206ENST00000559790 ZNF182P17025 639 aaPredicted RBP13.65□□□□□ -0.22
CDC42BPB-206ENST00000559790 RPL5P46777 297 aaKnown RBP13.65□□□□□ -0.22
CDC42BPB-206ENST00000559790 HOXA1P49639 335 aaPredicted RBP13.65□□□□□ -0.22
CDC42BPB-206ENST00000559790 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
CDC42BPB-206ENST00000559790 TMEM229BQ8NBD8 167 aa13.65□□□□□ -0.22
CDC42BPB-206ENST00000559790 GLYATL2Q8WU03 294 aa13.65□□□□□ -0.22
CDC42BPB-206ENST00000559790 KRTAP17-1Q9BYP8 105 aa13.65□□□□□ -0.22
CDC42BPB-206ENST00000559790 TMEM222Q9H0R3 208 aa13.65□□□□□ -0.22
CDC42BPB-206ENST00000559790 NXPH3O95157 252 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 CDS2O95674 445 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 IFNA17P01571 189 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 OR5AC1P0C628 307 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 IGLC1P0CG04 106 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 RBMY1A1P0DJD3 496 aaKnown RBP13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 RBMY1CP0DJD4 496 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 SNCAP37840 140 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 P2RY1P47900 373 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 RBMY1FQ15415 496 aaKnown RBP13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 TIGITQ495A1 244 aa13.64□□□□□ -0.23
CDC42BPB-206ENST00000559790 FAT2Q9NYQ8 4349 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 CORTO00230 105 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 CD5P06127 495 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 RBMS2Q15434 407 aaKnown RBP13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 TRIM16LQ309B1 348 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 MZT2AQ6P582 158 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 C11orf45Q8TAV5 145 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 GLMPQ8WWB7 406 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 X6R8D5 127 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 KIAA1109Q2LD37 5005 aa13.63□□□□□ -0.23
CDC42BPB-206ENST00000559790 KNCNA6PVL3 124 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 GABARAPH6UMI1 98 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 RAB3DO95716 219 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 ZNF688P0C7X2 276 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 OPRK1P41145 380 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 TAS2R19P59542 299 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 SPCS2Q15005 226 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 SCGB2B2Q4G0G5 96 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 GPR107Q5VW38 600 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 STEAP1BQ6NZ63 245 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 PRSS54Q6PEW0 395 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 CSNK1G2-AS1Q8NCQ2 148 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 GRAMD2BQ96HH9 432 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 COPZ2Q9P299 210 aa13.62□□□□□ -0.23
CDC42BPB-206ENST00000559790 CTDSP2O14595 271 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 NPPCP23582 126 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 SPCS3P61009 180 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 PAFAH1B2P68402 229 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 TMEM187Q14656 261 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 MEF2DQ14814 521 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 SELENOHQ8IZQ5 122 aaKnown RBP13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 CCDC71LQ8N9Z2 235 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 STXBP6Q8NFX7 210 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 OR4C16Q8NGL9 310 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 OR52E5Q8NH55 327 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 ZFAND1Q8TCF1 268 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 SMIM4Q8WVI0 70 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 AP3S1Q92572 193 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 TMEM230Q96A57 120 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 GPR146Q96CH1 333 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 NAA60Q9H7X0 242 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 CACNG5Q9UF02 275 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 FBXL17Q9UF56 701 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
CDC42BPB-206ENST00000559790 PKHD1P08F94 4074 aa13.6□□□□□ -0.23
CDC42BPB-206ENST00000559790 IGHV4-28A0A0C4DH34 117 aa13.6□□□□□ -0.23
CDC42BPB-206ENST00000559790 ZNF705EA8MWA4 302 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPB-206ENST00000559790 DNASE2O00115 360 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPB-206ENST00000559790 ALDH3B2P48448 385 aa13.6□□□□□ -0.23
CDC42BPB-206ENST00000559790 USF2Q15853 346 aaPredicted RBP13.6□□□□□ -0.23
CDC42BPB-206ENST00000559790 C2orf83Q53S99 150 aa13.6□□□□□ -0.23
CDC42BPB-206ENST00000559790 FAM219AQ8IW50 185 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms