RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SLC24A4Q8NFF2 622 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 OR52E5Q8NH55 327 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 OR1S1Q8NH92 325 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 IL22RA2Q969J5 263 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 GALNT14Q96FL9 552 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 SLC25A21Q9BQT8 299 aaPredicted RBP6.15□□□□□ -1.42
SNX1-207ENST00000559401 TM2D3Q9BRN9 247 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 HIPK2Q9H2X6 1198 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 UBQLN2Q9UHD9 624 aa6.15□□□□□ -1.42
SNX1-207ENST00000559401 TRAV14DV4A0A0A6YYC5 116 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 A0A0B4J2A0 478 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 PIGBOS1A0A0B4J2F0 54 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 IGHV7-4-1A0A0J9YVY3 117 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 OR4C46A6NHA9 309 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 K7EMT4 169 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 TSPAN4O14817 238 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 IFNA10P01566 189 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 NPY1RP25929 384 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 FCGR2BP31994 310 aaPredicted RBP6.14□□□□□ -1.43
SNX1-207ENST00000559401 BMI1P35226 326 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 CCR6P51684 374 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 SMCO1Q147U7 214 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 TMEM128Q5BJH2 165 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 CENPSQ8N2Z9 138 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 TMEM116Q8NCL8 245 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 DTD1Q8TEA8 209 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 DEDD2Q8WXF8 326 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 RNF2Q99496 336 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 SPAG8Q99932 426 aaPredicted RBP6.14□□□□□ -1.43
SNX1-207ENST00000559401 FAM110AQ9BQ89 295 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 RHPN1-AS1Q9BWJ2 59 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 SRRQ9GZT4 340 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 RETNQ9HD89 108 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 CACFD1Q9UGQ2 172 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 SHPKQ9UHJ6 478 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 SMPXQ9UHP9 88 aa6.14□□□□□ -1.43
SNX1-207ENST00000559401 PUS1Q9Y606 427 aaKnown RBP eCLIP6.14□□□□□ -1.43
SNX1-207ENST00000559401 IGHV3-66A0A0C4DH42 116 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 CENPXA8MT69 81 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 CLN5O75503 358 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 TMEM50AO95807 157 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 RND2P52198 227 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 RPL11P62913 178 aaKnown RBP6.13□□□□□ -1.43
SNX1-207ENST00000559401 TNFRSF9Q07011 255 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 RBMS2Q15434 407 aaKnown RBP6.13□□□□□ -1.43
SNX1-207ENST00000559401 MLANAQ16655 118 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 AARDQ4LEZ3 155 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 C2orf83Q53S99 150 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 NMSQ5H8A3 153 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 TOMM20LQ6UXN7 152 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 NOXA1Q86UR1 476 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 GBGT1Q8N5D6 347 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 MUC7Q8TAX7 377 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 RBKSQ9H477 322 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 FNDC4Q9H6D8 234 aaPredicted RBP6.13□□□□□ -1.43
SNX1-207ENST00000559401 NDUFA13Q9P0J0 144 aa6.13□□□□□ -1.43
SNX1-207ENST00000559401 MRPL36Q9P0J6 103 aaKnown RBP6.13□□□□□ -1.43
SNX1-207ENST00000559401 PAIP2BQ9ULR5 123 aaKnown RBP6.13□□□□□ -1.43
SNX1-207ENST00000559401 STAB2Q8WWQ8 2551 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 TRAV30A0A087WSZ9 112 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 LOC102724200A0A096LPH7 203 aaPredicted RBP6.12□□□□□ -1.43
SNX1-207ENST00000559401 A0A1B0GU03 582 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 DUXBA0A1W2PPF3 345 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 RBMY1BA6NDE4 496 aaKnown RBP6.12□□□□□ -1.43
SNX1-207ENST00000559401 RBMY1EA6NEQ0 496 aaKnown RBP6.12□□□□□ -1.43
SNX1-207ENST00000559401 NAP1L6A6NFF2 107 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 CHEK1O14757 476 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 SFT2D2O95562 160 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 IFNA4P05014 189 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 HOXB5P09067 269 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 RBMY1DP0C7P1 496 aaKnown RBP6.12□□□□□ -1.43
SNX1-207ENST00000559401 IAPPP10997 89 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 SLC25A4P12235 298 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 PAFAH1B2P68402 229 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 PPP1R1AQ13522 171 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 BAK1Q16611 211 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 BSXQ3C1V8 233 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 TIGITQ495A1 244 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 ETFRF1Q6IPR1 90 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 TCF24Q7RTU0 167 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 WFDC3Q8IUB2 231 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 OR4X1Q8NH49 305 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 RNASEH2CQ8TDP1 164 aaKnown RBP6.12□□□□□ -1.43
SNX1-207ENST00000559401 ST8SIA2Q92186 375 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 ACY3Q96HD9 319 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 NARS2Q96I59 477 aaKnown RBP6.12□□□□□ -1.43
SNX1-207ENST00000559401 OR10C1Q96KK4 312 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 CITED4Q96RK1 184 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 METTL26Q96S19 204 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 GGTLC1Q9BX51 225 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 TMEM231Q9H6L2 316 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 ZFAND3Q9H8U3 227 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 HSPB7Q9UBY9 170 aa6.12□□□□□ -1.43
SNX1-207ENST00000559401 TENM3Q9P273 2699 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 C3orf84H3BNL1 204 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 DNASE2O00115 360 aaPredicted RBP6.11□□□□□ -1.43
SNX1-207ENST00000559401 NDUFB6O95139 128 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 APOHP02749 345 aaPredicted RBP6.11□□□□□ -1.43
SNX1-207ENST00000559401 LYL1P12980 280 aa6.11□□□□□ -1.43
SNX1-207ENST00000559401 IL7P13232 177 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms