RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SRRQ9GZT4 340 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 SRD5A3Q9H8P0 318 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 ENY2Q9NPA8 101 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.2□□□□□ -1.1
SPG11-216ENST00000559347 RYR3Q15413 4870 aa8.2□□□□□ -1.1
SPG11-216ENST00000559347 DYNC2H1Q8NCM8 4307 aaKnown RBP8.2□□□□□ -1.1
SPG11-216ENST00000559347 A0A0B4J2A0 478 aa8.19□□□□□ -1.1
SPG11-216ENST00000559347 TSPAN4O14817 238 aa8.19□□□□□ -1.1
SPG11-216ENST00000559347 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
SPG11-216ENST00000559347 SUB1P53999 127 aaKnown RBP eCLIP8.19□□□□□ -1.1
SPG11-216ENST00000559347 NMSQ5H8A3 153 aa8.19□□□□□ -1.1
SPG11-216ENST00000559347 SPANXN2Q5MJ10 180 aa8.19□□□□□ -1.1
SPG11-216ENST00000559347 RBPMS2Q6ZRY4 209 aaKnown RBP8.19□□□□□ -1.1
SPG11-216ENST00000559347 SPAG8Q99932 426 aaPredicted RBP8.19□□□□□ -1.1
SPG11-216ENST00000559347 FNDC4Q9H6D8 234 aaPredicted RBP8.19□□□□□ -1.1
SPG11-216ENST00000559347 SHPKQ9UHJ6 478 aa8.19□□□□□ -1.1
SPG11-216ENST00000559347 KCNIP3Q9Y2W7 256 aa8.19□□□□□ -1.1
SPG11-216ENST00000559347 IGHV7-4-1A0A0J9YVY3 117 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 RBMY1BA6NDE4 496 aaKnown RBP8.18□□□□□ -1.1
SPG11-216ENST00000559347 RBMY1EA6NEQ0 496 aaKnown RBP8.18□□□□□ -1.1
SPG11-216ENST00000559347 NXPH3O95157 252 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 RBMY1DP0C7P1 496 aaKnown RBP8.18□□□□□ -1.1
SPG11-216ENST00000559347 SULT1A3P0DMM9 295 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 SULT1A4P0DMN0 295 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 ANXA3P12429 323 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 OPRK1P41145 380 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 HTR2BP41595 481 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 NPBWR1P48145 328 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 SRPXP78539 464 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 ANKRD55Q3KP44 614 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 C2orf83Q53S99 150 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 LYZL2Q7Z4W2 148 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 TMED4Q7Z7H5 227 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 DUSP18Q8NEJ0 188 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 SLC24A4Q8NFF2 622 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
SPG11-216ENST00000559347 HEYLQ9NQ87 328 aaPredicted RBP8.18□□□□□ -1.1
SPG11-216ENST00000559347 MRPL36Q9P0J6 103 aaKnown RBP8.18□□□□□ -1.1
SPG11-216ENST00000559347 CEBPZOSA8MTT3 80 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 YIF1AO95070 293 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 TNFRSF9Q07011 255 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 ODF3L2Q3SX64 289 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 TMEM128Q5BJH2 165 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 LAMTOR1Q6IAA8 161 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 ZNF600Q6ZNG1 722 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 LGI3Q8N145 548 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 OR4X1Q8NH49 305 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 TMEM170AQ8WVE7 144 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 CITED4Q96RK1 184 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 SLC25A21Q9BQT8 299 aaPredicted RBP8.17□□□□□ -1.1
SPG11-216ENST00000559347 GINS3Q9BRX5 216 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 HIPK2Q9H2X6 1198 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 EDA2RQ9HAV5 297 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 RETNQ9HD89 108 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 HSPB7Q9UBY9 170 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 SMPXQ9UHP9 88 aa8.17□□□□□ -1.1
SPG11-216ENST00000559347 IGHV3-49A0A0A0MS15 119 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 A0A1B0GU03 582 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 DUXBA0A1W2PPF3 345 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 CHEK1O14757 476 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 CLN5O75503 358 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 TMEM50AO95807 157 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 NPY1RP25929 384 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 CCR6P51684 374 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 SMCO1Q147U7 214 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 RBMS2Q15434 407 aaKnown RBP8.16□□□□□ -1.1
SPG11-216ENST00000559347 BAK1Q16611 211 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 TOMM20LQ6UXN7 152 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 TMEM116Q8NCL8 245 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 MUC7Q8TAX7 377 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 RNF2Q99496 336 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 RHPN1-AS1Q9BWJ2 59 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 CACFD1Q9UGQ2 172 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 UBQLN2Q9UHD9 624 aa8.16□□□□□ -1.1
SPG11-216ENST00000559347 PUS1Q9Y606 427 aaKnown RBP eCLIP8.16□□□□□ -1.1
SPG11-216ENST00000559347 TENM2Q9NT68 2774 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 IGHV3OR16-13A0A075B7E8 117 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 TRAV14DV4A0A0A6YYC5 116 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 IGHV3-74A0A0B4J1X5 117 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 PIGBOS1A0A0B4J2F0 54 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 RPS10-NUDT3A0A1W2PQS6 291 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 OR4C46A6NHA9 309 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 C3orf84H3BNL1 204 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 VAMP1P23763 118 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 PPP1R1AQ13522 171 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 MLANAQ16655 118 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 TRIQKQ629K1 86 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 CENPSQ8N2Z9 138 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 LRTM2Q8N967 370 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 RNASEH2CQ8TDP1 164 aaKnown RBP8.15□□□□□ -1.1
SPG11-216ENST00000559347 DTD1Q8TEA8 209 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 ST8SIA2Q92186 375 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 SDHCQ99643 169 aaPredicted RBP8.15□□□□□ -1.1
SPG11-216ENST00000559347 FAM110AQ9BQ89 295 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 GGTLC1Q9BX51 225 aa8.15□□□□□ -1.1
SPG11-216ENST00000559347 SCGB2A1O75556 95 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 IGKV1-17P01599 117 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 SLC25A4P12235 298 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 BTCP35070 178 aa8.14□□□□□ -1.11
SPG11-216ENST00000559347 RND2P52198 227 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms