RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 I3L521 148 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 K7EIM0 57 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 CCL24O00175 119 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 NUPL2O15504 423 aaKnown RBP7.15□□□□□ -1.26
LDLR-210ENST00000559340 GNG7O60262 68 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 GGCTO75223 188 aaKnown RBP7.15□□□□□ -1.26
LDLR-210ENST00000559340 PF4P02776 101 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 CLEC3BP05452 202 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 FABP1P07148 127 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 S100A11P31949 105 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 PAX9P55771 341 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 BAXQ07812 192 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 ZNF616Q08AN1 781 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 ATP6V1FQ16864 119 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 TMEM14EPQ6UXP3 125 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 CLEC19AQ6UXS0 136 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 C19orf35Q6ZS72 473 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 OR11H1Q8NG94 326 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 OR2T35Q8NGX2 323 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 OR4X1Q8NH49 305 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 CHAC2Q8WUX2 184 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 BSCL2Q96G97 398 aaPredicted RBP7.15□□□□□ -1.26
LDLR-210ENST00000559340 OR5B12Q96R08 314 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 OR4C12Q96R67 309 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 GGACTQ9BVM4 153 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 GNB4Q9HAV0 340 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 ZC4H2Q9NQZ6 224 aa7.15□□□□□ -1.26
LDLR-210ENST00000559340 MFSD2BA6NFX1 497 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 FAM24AA6NFZ4 105 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 TGOLN2O43493 480 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 CLN5O75503 358 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 METTL15P1P0C7V9 234 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 ARL3P36405 182 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 SULT1A1P50225 295 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 DLK1P80370 383 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 RELQ04864 619 aaPredicted RBP7.14□□□□□ -1.27
LDLR-210ENST00000559340 RPEL1Q2QD12 228 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 FAM106AQ4KMX7 169 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 OR8G2PQ6IF36 304 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 C11orf87Q6NUJ2 197 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 C8orf86Q6ZUL3 223 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 SLC16A13Q7RTY0 426 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 TMEM252Q8N6L7 170 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 UBAC2Q8NBM4 344 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 INO80EQ8NBZ0 244 aaPredicted RBP7.14□□□□□ -1.27
LDLR-210ENST00000559340 TMEM116Q8NCL8 245 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 OR1S2Q8NGQ3 325 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 WDR89Q96FK6 387 aaPredicted RBP7.14□□□□□ -1.27
LDLR-210ENST00000559340 RNF126Q9BV68 326 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 C11orf1Q9H5F2 150 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 DMRT1Q9Y5R6 373 aa7.14□□□□□ -1.27
LDLR-210ENST00000559340 IGHV3-21A0A0B4J1V1 117 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 ADARB2-AS1A8MUL3 147 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 CCNKO75909 580 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 TMEM50AO95807 157 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 LYL1P12980 280 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 GPR183P32249 361 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 RND2P52198 227 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 RAB31Q13636 194 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 ZNF546Q86UE3 836 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 LILRB2Q8N423 598 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 TMEM170AQ8WVE7 144 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 FNDC4Q9H6D8 234 aaPredicted RBP7.13□□□□□ -1.27
LDLR-210ENST00000559340 NPVFQ9HCQ7 196 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 OR5AC2Q9NZP5 309 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 MBD2Q9UBB5 411 aa7.13□□□□□ -1.27
LDLR-210ENST00000559340 hCG_2014768A0A024R1R8 64 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 IGHV4OR15-8A0A075B7B6 117 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 A0A087WW49 117 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 SMCO3A2RU48 225 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 OR2T8A6NH00 312 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 ZFP92A6NM28 416 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 H0YIZ8 118 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 DFFBO76075 338 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 CST7O76096 145 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 CFDP00746 253 aaPredicted RBP7.12□□□□□ -1.27
LDLR-210ENST00000559340 IGHV3-23P01764 117 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 RPL12P30050 165 aaKnown RBP7.12□□□□□ -1.27
LDLR-210ENST00000559340 S100A7P31151 101 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 DEFA5Q01523 94 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 AKR1C1Q04828 323 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 SLC38A11Q08AI6 406 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 GAMTQ14353 236 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 MLANAQ16655 118 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 C18orf65Q6ZTR6 163 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 TMEM144Q7Z5S9 345 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 AKAP14Q86UN6 197 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 GPHB5Q86YW7 130 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 Q8WTZ3 238 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 NPIPB3Q92617 1050 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 ACY3Q96HD9 319 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 RAX2Q96IS3 184 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 CCDC140Q96MF4 163 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 MCRIP2Q9BUT9 160 aaKnown RBP7.12□□□□□ -1.27
LDLR-210ENST00000559340 ELOVL1Q9BW60 279 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 PEMTQ9UBM1 199 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 S4R3C0 116 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 SORL1Q92673 2214 aa7.12□□□□□ -1.27
LDLR-210ENST00000559340 FXYD6-FXYD2A0A087WZ82 144 aa7.11□□□□□ -1.27
LDLR-210ENST00000559340 IGSF23A1L1A6 192 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms