RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 NPY1RP25929 384 aa14.15□□□□□ -0.14
CASC4-209ENST00000559222 FCGR2BP31994 310 aaPredicted RBP14.15□□□□□ -0.14
CASC4-209ENST00000559222 OPRK1P41145 380 aa14.15□□□□□ -0.14
CASC4-209ENST00000559222 SUB1P53999 127 aaKnown RBP eCLIP14.15□□□□□ -0.14
CASC4-209ENST00000559222 FAM106AQ4KMX7 169 aa14.15□□□□□ -0.14
CASC4-209ENST00000559222 MITD1Q8WV92 249 aa14.15□□□□□ -0.14
CASC4-209ENST00000559222 SIGLEC8Q9NYZ4 499 aa14.15□□□□□ -0.14
CASC4-209ENST00000559222 MLXQ9UH92 298 aa14.15□□□□□ -0.14
CASC4-209ENST00000559222 DNAH9Q9NYC9 4486 aa14.14□□□□□ -0.15
CASC4-209ENST00000559222 CBLN1P23435 193 aa14.14□□□□□ -0.15
CASC4-209ENST00000559222 CD300EQ496F6 205 aaPredicted RBP14.14□□□□□ -0.15
CASC4-209ENST00000559222 DEFB121Q5J5C9 76 aa14.14□□□□□ -0.15
CASC4-209ENST00000559222 MZT2BQ6NZ67 158 aa14.14□□□□□ -0.15
CASC4-209ENST00000559222 SPSB3Q6PJ21 355 aa14.14□□□□□ -0.15
CASC4-209ENST00000559222 OR10C1Q96KK4 312 aa14.14□□□□□ -0.15
CASC4-209ENST00000559222 ATP6V0BQ99437 205 aa14.14□□□□□ -0.15
CASC4-209ENST00000559222 HIPK2Q9H2X6 1198 aa14.14□□□□□ -0.15
CASC4-209ENST00000559222 LSM4Q9Y4Z0 139 aaKnown RBP14.14□□□□□ -0.15
CASC4-209ENST00000559222 C15orf62A8K5M9 175 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 GNG7O60262 68 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 IFNA10P01566 189 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 DEFB114Q30KQ6 69 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 NRARPQ7Z6K4 114 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 UXS1Q8NBZ7 420 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 OR4D5Q8NGN0 318 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 DYNLRB2Q8TF09 96 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 TXN2Q99757 166 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 C20orf24Q9BUV8 137 aa14.13□□□□□ -0.15
CASC4-209ENST00000559222 CORTO00230 105 aa14.12□□□□□ -0.15
CASC4-209ENST00000559222 NDUFA4O00483 81 aa14.12□□□□□ -0.15
CASC4-209ENST00000559222 NUPL2O15504 423 aaKnown RBP14.12□□□□□ -0.15
CASC4-209ENST00000559222 TMEM50AO95807 157 aa14.12□□□□□ -0.15
CASC4-209ENST00000559222 BTNL8Q6UX41 500 aa14.12□□□□□ -0.15
CASC4-209ENST00000559222 DUSP18Q8NEJ0 188 aa14.12□□□□□ -0.15
CASC4-209ENST00000559222 ZNF431Q8TF32 576 aaPredicted RBP14.12□□□□□ -0.15
CASC4-209ENST00000559222 PIGBOS1A0A0B4J2F0 54 aa14.11□□□□□ -0.15
CASC4-209ENST00000559222 FAM90A26D6RGX4 464 aa14.11□□□□□ -0.15
CASC4-209ENST00000559222 WRBO00258 174 aa14.11□□□□□ -0.15
CASC4-209ENST00000559222 RND2P52198 227 aa14.11□□□□□ -0.15
CASC4-209ENST00000559222 POLR2GP62487 172 aaKnown RBP eCLIP14.11□□□□□ -0.15
CASC4-209ENST00000559222 PRSS54Q6PEW0 395 aa14.11□□□□□ -0.15
CASC4-209ENST00000559222 ENKURQ8TC29 256 aa14.11□□□□□ -0.15
CASC4-209ENST00000559222 WDR89Q96FK6 387 aaPredicted RBP14.11□□□□□ -0.15
CASC4-209ENST00000559222 IGHV3-49A0A0A0MS15 119 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 H3BP45 60 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 SYNGR2O43760 224 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 CLN5O75503 358 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 C8orf88P0DMB2 117 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 NPBWR1P48145 328 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 TIGITQ495A1 244 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 TMEM61Q8N0U2 210 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 Q8N1Y9 231 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 ZBTB8BQ8NAP8 495 aaPredicted RBP14.1□□□□□ -0.15
CASC4-209ENST00000559222 OR4X1Q8NH49 305 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 RNASEH2CQ8TDP1 164 aaKnown RBP14.1□□□□□ -0.15
CASC4-209ENST00000559222 ZFAND3Q9H8U3 227 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 ZMAT5Q9UDW3 170 aaKnown RBP14.1□□□□□ -0.15
CASC4-209ENST00000559222 UFC1Q9Y3C8 167 aa14.1□□□□□ -0.15
CASC4-209ENST00000559222 ZNF785A8K8V0 405 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 IFNA21P01568 189 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 IGKV1-17P01599 117 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 ID3Q02535 119 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 IAH1Q2TAA2 248 aaPredicted RBP14.09□□□□□ -0.15
CASC4-209ENST00000559222 TOMM20LQ6UXN7 152 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 SLC16A13Q7RTY0 426 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 PALMDQ9NP74 551 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 GAR1Q9NY12 217 aaKnown RBP14.09□□□□□ -0.15
CASC4-209ENST00000559222 CACFD1Q9UGQ2 172 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 U3KQ87 197 aa14.09□□□□□ -0.15
CASC4-209ENST00000559222 IGHV3OR16-13A0A075B7E8 117 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 IGHV3-74A0A0B4J1X5 117 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 YIF1AO95070 293 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 SCGB1D2O95969 90 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 IGLC1P0CG04 106 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 ELLP55199 621 aaPredicted RBP14.08□□□□□ -0.16
CASC4-209ENST00000559222 RELQ04864 619 aaPredicted RBP14.08□□□□□ -0.16
CASC4-209ENST00000559222 CD69Q07108 199 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 LCN12Q6JVE5 192 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 C12orf45Q8N5I9 185 aaPredicted RBP14.08□□□□□ -0.16
CASC4-209ENST00000559222 NPIPB3Q92617 1050 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 ACY3Q96HD9 319 aa14.08□□□□□ -0.16
CASC4-209ENST00000559222 DAZ1Q9NQZ3 744 aaKnown RBP14.08□□□□□ -0.16
CASC4-209ENST00000559222 PAIP2BQ9ULR5 123 aaKnown RBP14.08□□□□□ -0.16
CASC4-209ENST00000559222 PUS1Q9Y606 427 aaKnown RBP eCLIP14.08□□□□□ -0.16
CASC4-209ENST00000559222 RPS10-NUDT3A0A1W2PQS6 291 aa14.07□□□□□ -0.16
CASC4-209ENST00000559222 SSSCA1O60232 199 aa14.07□□□□□ -0.16
CASC4-209ENST00000559222 MED6O75586 246 aa14.07□□□□□ -0.16
CASC4-209ENST00000559222 CCNKO75909 580 aa14.07□□□□□ -0.16
CASC4-209ENST00000559222 SCAF4O95104 1147 aaKnown RBP14.07□□□□□ -0.16
CASC4-209ENST00000559222 APOHP02749 345 aaPredicted RBP14.07□□□□□ -0.16
CASC4-209ENST00000559222 IFNA4P05014 189 aa14.07□□□□□ -0.16
CASC4-209ENST00000559222 NKX2-1P43699 371 aaPredicted RBP14.07□□□□□ -0.16
CASC4-209ENST00000559222 ZNF600Q6ZNG1 722 aa14.07□□□□□ -0.16
CASC4-209ENST00000559222 WFDC10AQ9H1F0 79 aa14.07□□□□□ -0.16
CASC4-209ENST00000559222 MRPL27Q9P0M9 148 aaKnown RBP14.07□□□□□ -0.16
CASC4-209ENST00000559222 GSKIPQ9P0R6 139 aa14.07□□□□□ -0.16
CASC4-209ENST00000559222 RCL1Q9Y2P8 373 aaKnown RBP14.07□□□□□ -0.16
CASC4-209ENST00000559222 FAM25EA8MYX2 175 aa14.06□□□□□ -0.16
CASC4-209ENST00000559222 PRSS46E5RG02 174 aa14.06□□□□□ -0.16
CASC4-209ENST00000559222 IL5P05113 134 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms