RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 LYRM7Q5U5X0 104 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 FP248Q71RG6 208 aaPredicted RBP1.68□□□□□ -2.14
CASC4-206ENST00000558847 CLVS1Q8IUQ0 354 aaPredicted RBP1.68□□□□□ -2.14
CASC4-206ENST00000558847 C12orf45Q8N5I9 185 aaPredicted RBP1.68□□□□□ -2.14
CASC4-206ENST00000558847 SIGLECL1Q8N7X8 197 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 OR11H6Q8NGC7 330 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 PHB2Q99623 299 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 RNASE7Q9H1E1 156 aaKnown RBP1.68□□□□□ -2.14
CASC4-206ENST00000558847 OSTCQ9NRP0 149 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 MED9Q9NWA0 146 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 TONSLQ96HA7 1378 aa1.68□□□□□ -2.14
CASC4-206ENST00000558847 CCDC144AA2RUR9 1427 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 TRBV6-5A0A0K0K1A5 114 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 BUB1B-PAK6H3BSN5 160 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 CLPSP04118 112 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 SHBGP04278 402 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 UBBP0CG47 229 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 ERP29P30040 261 aaKnown RBP1.67□□□□□ -2.14
CASC4-206ENST00000558847 DEFA1P59665 94 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 CDC42P60953 191 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 RUNX1Q01196 453 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 ZNF826PQ6ZT77 177 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 C9orf163Q8N9P6 203 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 OR5A1Q8NGJ0 315 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 Q96M85 177 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 SERPINI1Q99574 410 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 FAM32AQ9Y421 112 aaKnown RBP1.67□□□□□ -2.14
CASC4-206ENST00000558847 KIF24Q5T7B8 1368 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 GBF1Q92538 1859 aa1.67□□□□□ -2.14
CASC4-206ENST00000558847 FN1P02751 2386 aaKnown RBP1.66□□□□□ -2.14
CASC4-206ENST00000558847 KIF13BQ9NQT8 1826 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 IGKV2-29A2NJV5 120 aaPredicted RBP1.66□□□□□ -2.14
CASC4-206ENST00000558847 C7orf71A4D174 169 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 OR2J2O76002 312 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 CAPZBP47756 277 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 CTAG1AP78358 180 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 RHEBQ15382 184 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 PHF13Q86YI8 300 aaPredicted RBP1.66□□□□□ -2.14
CASC4-206ENST00000558847 FAM172AQ8WUF8 416 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 MRPL32Q9BYC8 188 aaKnown RBP1.66□□□□□ -2.14
CASC4-206ENST00000558847 OR5AC2Q9NZP5 309 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 EPDR1Q9UM22 224 aa1.66□□□□□ -2.14
CASC4-206ENST00000558847 A0A087X0T9 212 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 MRPS14O60783 128 aaKnown RBP1.65□□□□□ -2.15
CASC4-206ENST00000558847 SMIM17P0DL12 118 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 LINC01554Q52M75 96 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 Q6ZQT0 140 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 SLC25A40Q8TBP6 338 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 GPR146Q96CH1 333 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 CEP19Q96LK0 163 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 ENY2Q9NPA8 101 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 OPTCQ9UBM4 332 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 CRCT1Q9UGL9 99 aa1.65□□□□□ -2.15
CASC4-206ENST00000558847 GREB1Q4ZG55 1949 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 COL11A1P12107 1806 aaPredicted RBP1.64□□□□□ -2.15
CASC4-206ENST00000558847 FBN1P35555 2871 aaKnown RBP1.64□□□□□ -2.15
CASC4-206ENST00000558847 FAM159BA6NKW6 160 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 OR4E1P0C645 316 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 BAALC-AS2P0C853 105 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 IL9P15248 144 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 LCA10Q71F78 164 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 C12orf29Q8N999 325 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 PXT1Q8NFP0 134 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 OR10X1Q8NGY0 326 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 DGCR14Q96DF8 476 aaKnown RBP1.64□□□□□ -2.15
CASC4-206ENST00000558847 C9orf16Q9BUW7 83 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 TAS2R4Q9NYW5 299 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 STOML2Q9UJZ1 356 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 AMMECR1Q9Y4X0 333 aaPredicted RBP1.64□□□□□ -2.15
CASC4-206ENST00000558847 ZFHX2Q9C0A1 2572 aaPredicted RBP1.64□□□□□ -2.15
CASC4-206ENST00000558847 FMN1Q68DA7 1419 aa1.64□□□□□ -2.15
CASC4-206ENST00000558847 PTPRBP23467 1997 aa1.63□□□□□ -2.15
CASC4-206ENST00000558847 TRBV19A0A075B6N1 114 aa1.63□□□□□ -2.15
CASC4-206ENST00000558847 CYB5BO43169 146 aa1.63□□□□□ -2.15
CASC4-206ENST00000558847 CTSDP07339 412 aaPredicted RBP1.63□□□□□ -2.15
CASC4-206ENST00000558847 HSPE1P61604 102 aaKnown RBP1.63□□□□□ -2.15
CASC4-206ENST00000558847 IMUPQ9GZP8 106 aa1.63□□□□□ -2.15
CASC4-206ENST00000558847 ARMC1Q9NVT9 282 aa1.63□□□□□ -2.15
CASC4-206ENST00000558847 SLC35A3Q9Y2D2 325 aa1.63□□□□□ -2.15
CASC4-206ENST00000558847 CPAMD8Q8IZJ3 1885 aa1.63□□□□□ -2.15
CASC4-206ENST00000558847 MAST2Q6P0Q8 1798 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 TRAV14DV4A0A0A6YYC5 116 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 SULT1B1O43704 296 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 IFNA7P01567 189 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 ZNF846Q147U1 533 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 UNQ6190/PRO20217Q6UXQ8 127 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 GOLT1AQ6ZVE7 132 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 OR8D4Q8NGM9 314 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 HIST1H2BLQ99880 126 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 ADAT1Q9BUB4 502 aaKnown RBP1.62□□□□□ -2.15
CASC4-206ENST00000558847 IL20Q9NYY1 176 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 SOX21Q9Y651 276 aaPredicted RBP1.62□□□□□ -2.15
CASC4-206ENST00000558847 HECW2Q9P2P5 1572 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 CR1P17927 2039 aa1.62□□□□□ -2.15
CASC4-206ENST00000558847 DOCK5Q9H7D0 1870 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 SETD5Q9C0A6 1442 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 SORL1Q92673 2214 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 IGKV2-40A0A087WW87 121 aaPredicted RBP1.61□□□□□ -2.15
CASC4-206ENST00000558847 IGKV3D-7A0A0C4DH55 119 aa1.61□□□□□ -2.15
CASC4-206ENST00000558847 IGKV3OR2-268A0A0C4DH90 116 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms