RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 PUS1Q9Y606 427 aaKnown RBP eCLIP8.46□□□□□ -1.06
CASC4-205ENST00000558735 VPS13DQ5THJ4 4388 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 MPTX1A8MV57 137 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 ATG12O94817 140 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 CDS2O95674 445 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 CD5P06127 495 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 RPL5P46777 297 aaKnown RBP8.45□□□□□ -1.06
CASC4-205ENST00000558735 SUB1P53999 127 aaKnown RBP eCLIP8.45□□□□□ -1.06
CASC4-205ENST00000558735 TAS2R19P59542 299 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 PAFAH1B2P68402 229 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 SCGB2B2Q4G0G5 96 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 SLC35G3Q8N808 338 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 C15orf40Q8WUR7 153 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 RRNAD1Q96FB5 475 aaKnown RBP8.45□□□□□ -1.06
CASC4-205ENST00000558735 GINS3Q9BRX5 216 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 C6orf62Q9GZU0 229 aaPredicted RBP8.45□□□□□ -1.06
CASC4-205ENST00000558735 MS4A6AQ9H2W1 248 aa8.45□□□□□ -1.06
CASC4-205ENST00000558735 GABARAPH6UMI1 98 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 CLN5O75503 358 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 TRIM16LQ309B1 348 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 BSXQ3C1V8 233 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 AARDQ4LEZ3 155 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 FAAP20Q6NZ36 180 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 RPP25LQ8N5L8 163 aaKnown RBP8.44□□□□□ -1.06
CASC4-205ENST00000558735 FAM24BQ8N5W8 94 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 CCDC71LQ8N9Z2 235 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 LHFPL5Q8TAF8 219 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 RARRES2Q99969 163 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 TMEM222Q9H0R3 208 aa8.44□□□□□ -1.06
CASC4-205ENST00000558735 TEX13DA0A0J9YY54 714 aaPredicted RBP8.43□□□□□ -1.06
CASC4-205ENST00000558735 DNASE2O00115 360 aaPredicted RBP8.43□□□□□ -1.06
CASC4-205ENST00000558735 CORTO00230 105 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 B3GALNT1O75752 331 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 IGKV1-17P01599 117 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 OR5AC1P0C628 307 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 NPPCP23582 126 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 CRYBB3P26998 211 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 ALDH3B2P48448 385 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 HOXA1P49639 335 aaPredicted RBP8.43□□□□□ -1.06
CASC4-205ENST00000558735 DEFB131AP59861 70 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 SPCS3P61009 180 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 RPL11P62913 178 aaKnown RBP8.43□□□□□ -1.06
CASC4-205ENST00000558735 SSBP1Q04837 148 aaKnown RBP8.43□□□□□ -1.06
CASC4-205ENST00000558735 SPCS2Q15005 226 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 SELENOHQ8IZQ5 122 aaKnown RBP8.43□□□□□ -1.06
CASC4-205ENST00000558735 OR4X1Q8NH49 305 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 GATAD1Q8WUU5 269 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 PDCD10Q9BUL8 212 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.43□□□□□ -1.06
CASC4-205ENST00000558735 GPR132Q9UNW8 380 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 DNAH6Q9C0G6 4158 aa8.43□□□□□ -1.06
CASC4-205ENST00000558735 TRAV2A0A0B4J234 112 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 RGS5O15539 181 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 OPRK1P41145 380 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 MRPS10P82664 201 aaKnown RBP8.42□□□□□ -1.06
CASC4-205ENST00000558735 LEMD1Q68G75 181 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 FAM219AQ8IW50 185 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 TMEM217Q8N7C4 229 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 OR11H2Q8NH07 326 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 OR52E5Q8NH55 327 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 PHLDA1Q8WV24 401 aaPredicted RBP8.42□□□□□ -1.06
CASC4-205ENST00000558735 TMEM230Q96A57 120 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 GPR146Q96CH1 333 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 ENY2Q9NPA8 101 aa8.42□□□□□ -1.06
CASC4-205ENST00000558735 KLK5Q9Y337 293 aaPredicted RBP8.42□□□□□ -1.06
CASC4-205ENST00000558735 A0A1W2PS18 150 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
CASC4-205ENST00000558735 DHODHQ02127 395 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 MEF2DQ14814 521 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 RBMS2Q15434 407 aaKnown RBP8.41□□□□□ -1.06
CASC4-205ENST00000558735 TIGITQ495A1 244 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 GPR141Q7Z602 305 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 RNASE11Q8TAA1 199 aaKnown RBP8.41□□□□□ -1.06
CASC4-205ENST00000558735 TMEM170AQ8WVE7 144 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 SMIM4Q8WVI0 70 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 RBPMSQ93062 196 aaKnown RBP8.41□□□□□ -1.06
CASC4-205ENST00000558735 TMEM231Q9H6L2 316 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 NAA60Q9H7X0 242 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 C14orf166Q9Y224 244 aaKnown RBP8.41□□□□□ -1.06
CASC4-205ENST00000558735 U3KQE9 123 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 PKHD1P08F94 4074 aa8.41□□□□□ -1.06
CASC4-205ENST00000558735 TRAV30A0A087WSZ9 112 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 CRYM-AS1A6NIL9 109 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 DISC1C4P0D8 188 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 K7EQG2 157 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 CTDSPLO15194 276 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 DEFB4AO15263 64 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 CA1P00915 261 aaPredicted RBP8.4□□□□□ -1.06
CASC4-205ENST00000558735 AKAIN1P0CW23 69 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 HTR2BP41595 481 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.06
CASC4-205ENST00000558735 SURF2Q15527 256 aaPredicted RBP8.4□□□□□ -1.06
CASC4-205ENST00000558735 C2orf83Q53S99 150 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 TMEM268Q5VZI3 342 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 PRSS54Q6PEW0 395 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 OR51S1Q8NGJ8 323 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 OR4C16Q8NGL9 310 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 DIRAS2Q96HU8 199 aa8.4□□□□□ -1.06
CASC4-205ENST00000558735 METTL26Q96S19 204 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms