RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 GAR1Q9NY12 217 aaKnown RBP12.04□□□□□ -0.48
RABGGTA-206ENST00000558649 TMEM213A2RRL7 107 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 MPTX1A8MV57 137 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 A8MWP6 167 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 ZNF207O43670 478 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 PITX3O75364 302 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 CTSGP08311 255 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 SLC25A6P12236 298 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 MLANAQ16655 118 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 C2orf83Q53S99 150 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 PVRIGQ6DKI7 326 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 UXS1Q8NBZ7 420 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 TMEM170AQ8WVE7 144 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 ATP6V0BQ99437 205 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 ZNF436Q9C0F3 470 aaPredicted RBP12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 PALMDQ9NP74 551 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 PAIP2BQ9ULR5 123 aaKnown RBP12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 UFC1Q9Y3C8 167 aa12.03□□□□□ -0.48
RABGGTA-206ENST00000558649 RPS10-NUDT3A0A1W2PQS6 291 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 IZUMO1RA6ND01 250 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 NDUFA4O00483 81 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 YIF1AO95070 293 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 CBLN1P23435 193 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 NPBWR1P48145 328 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 RELQ04864 619 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 CD300EQ496F6 205 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 LCN12Q6JVE5 192 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 MITD1Q8WV92 249 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 TMEM190Q8WZ59 177 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 SIGLEC8Q9NYZ4 499 aa12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 MRPL36Q9P0J6 103 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-206ENST00000558649 FAM90A26D6RGX4 464 aa12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 WRBO00258 174 aa12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 CCSO14618 274 aa12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 MED6O75586 246 aa12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 SCGB1D2O95969 90 aa12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 FCGR2BP31994 310 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 NOXA1Q86UR1 476 aa12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 RNASEH2CQ8TDP1 164 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 U3KQ87 197 aa12.01□□□□□ -0.49
RABGGTA-206ENST00000558649 SYNGR2O43760 224 aa12□□□□□ -0.49
RABGGTA-206ENST00000558649 IFNA4P05014 189 aa12□□□□□ -0.49
RABGGTA-206ENST00000558649 RND2P52198 227 aa12□□□□□ -0.49
RABGGTA-206ENST00000558649 IAH1Q2TAA2 248 aaPredicted RBP12□□□□□ -0.49
RABGGTA-206ENST00000558649 BTNL8Q6UX41 500 aa12□□□□□ -0.49
RABGGTA-206ENST00000558649 NRARPQ7Z6K4 114 aa12□□□□□ -0.49
RABGGTA-206ENST00000558649 ZNF431Q8TF32 576 aaPredicted RBP12□□□□□ -0.49
RABGGTA-206ENST00000558649 ACY3Q96HD9 319 aa12□□□□□ -0.49
RABGGTA-206ENST00000558649 DAZ1Q9NQZ3 744 aaKnown RBP12□□□□□ -0.49
RABGGTA-206ENST00000558649 MLXQ9UH92 298 aa12□□□□□ -0.49
RABGGTA-206ENST00000558649 DNAH3Q8TD57 4116 aa12□□□□□ -0.49
RABGGTA-206ENST00000558649 FAM25EA8MYX2 175 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 TMEM50AO95807 157 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 DEFA1P59665 94 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 DEFA3P59666 94 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 GUCA2BQ16661 112 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 DEFB114Q30KQ6 69 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 OR4X1Q8NH49 305 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 OR10C1Q96KK4 312 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 TECRQ9NZ01 308 aaKnown RBP11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 GSKIPQ9P0R6 139 aa11.99□□□□□ -0.49
RABGGTA-206ENST00000558649 IGHV3-49A0A0A0MS15 119 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 H3BP45 60 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 SSSCA1O60232 199 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 CLN5O75503 358 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 SCGB2A1O75556 95 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 SLC25A4P12235 298 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 NKX2-1P43699 371 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 ELLP55199 621 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 POLR2GP62487 172 aaKnown RBP eCLIP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 DCTN2Q13561 401 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 TIGITQ495A1 244 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 ETFRF1Q6IPR1 90 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 PRSS54Q6PEW0 395 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 SLC16A13Q7RTY0 426 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 C12orf45Q8N5I9 185 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 OR4D5Q8NGN0 318 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 OR2K2Q8NGT1 345 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 MARC2Q969Z3 335 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 WDR89Q96FK6 387 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 ZNF414Q96IQ9 312 aa11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 CIB3Q96Q77 187 aaPredicted RBP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 MRPL27Q9P0M9 148 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 LSM4Q9Y4Z0 139 aaKnown RBP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 PUS1Q9Y606 427 aaKnown RBP eCLIP11.98□□□□□ -0.49
RABGGTA-206ENST00000558649 C15orf62A8K5M9 175 aa11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 SCAF4O95104 1147 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 RAB11AP62491 216 aa11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 SPANXN5Q5MJ07 72 aa11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 ZNF600Q6ZNG1 722 aa11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 TMEM61Q8N0U2 210 aa11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 ZBTB8BQ8NAP8 495 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
RABGGTA-206ENST00000558649 IGHV3OR16-13A0A075B7E8 117 aa11.96□□□□□ -0.49
RABGGTA-206ENST00000558649 IGHV3-74A0A0B4J1X5 117 aa11.96□□□□□ -0.49
RABGGTA-206ENST00000558649 C5orf51A6NDU8 294 aa11.96□□□□□ -0.49
RABGGTA-206ENST00000558649 C8orf88P0DMB2 117 aa11.96□□□□□ -0.49
RABGGTA-206ENST00000558649 OR10J1P30954 320 aa11.96□□□□□ -0.49
RABGGTA-206ENST00000558649 RPP30P78346 268 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms