RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
CSHL1-208ENST00000558609 SCP2D1Q9UJQ7 156 aa11.56□□□□□ -0.56
CSHL1-208ENST00000558609 TMEM56-RWDD3S4R434 201 aa11.56□□□□□ -0.56
CSHL1-208ENST00000558609 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 YIF1AO95070 293 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 HOXA1P49639 335 aaPredicted RBP11.55□□□□□ -0.56
CSHL1-208ENST00000558609 BSXQ3C1V8 233 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 TRIQKQ629K1 86 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 TMEM116Q8NCL8 245 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 GPR146Q96CH1 333 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 GALNT14Q96FL9 552 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 SCGB3A2Q96PL1 93 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 CCDC32Q9BV29 185 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 RHPN1-AS1Q9BWJ2 59 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 GGTLC1Q9BX51 225 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 V9GYH0 126 aa11.55□□□□□ -0.56
CSHL1-208ENST00000558609 LOC102724200A0A096LPH7 203 aaPredicted RBP11.54□□□□□ -0.56
CSHL1-208ENST00000558609 TRAV14DV4A0A0A6YYC5 116 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 CHEK1O14757 476 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 TMEM50AO95807 157 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 DEFA1P59665 94 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 DEFA3P59666 94 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 TMEM268Q5VZI3 342 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 IL22RA2Q969J5 263 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 KCNIP3Q9Y2W7 256 aa11.54□□□□□ -0.56
CSHL1-208ENST00000558609 OR4C46A6NHA9 309 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 UPK1BO75841 260 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 TMEM187Q14656 261 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 TOMM20LQ6UXN7 152 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 TMEM230Q96A57 120 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 RNF2Q99496 336 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 SRRQ9GZT4 340 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 FNDC4Q9H6D8 234 aaPredicted RBP11.53□□□□□ -0.56
CSHL1-208ENST00000558609 MCUBQ9NWR8 336 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 CACNG5Q9UF02 275 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 CACFD1Q9UGQ2 172 aa11.53□□□□□ -0.56
CSHL1-208ENST00000558609 HTR2BP41595 481 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 KLF9Q13886 244 aaPredicted RBP11.52□□□□□ -0.57
CSHL1-208ENST00000558609 ZNF79Q15937 498 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 FAM90A2PQ658T7 463 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 ZNF600Q6ZNG1 722 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 OR4X1Q8NH49 305 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 TRIM63Q969Q1 353 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 GINS3Q9BRX5 216 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 UBQLN2Q9UHD9 624 aa11.52□□□□□ -0.57
CSHL1-208ENST00000558609 CSMD3Q7Z407 3707 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 IGHV3-49A0A0A0MS15 119 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 LINC00854A0A1B0GVQ3 168 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 CLN5O75503 358 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 CD5P06127 495 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 FAUP35544 74 aaKnown RBP11.51□□□□□ -0.57
CSHL1-208ENST00000558609 OPRK1P41145 380 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 SUPT4H1P63272 117 aaKnown RBP11.51□□□□□ -0.57
CSHL1-208ENST00000558609 MLANAQ16655 118 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 C2orf83Q53S99 150 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 ZFAND6Q6FIF0 208 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 ZFAND3Q9H8U3 227 aa11.51□□□□□ -0.57
CSHL1-208ENST00000558609 HEYLQ9NQ87 328 aaPredicted RBP11.51□□□□□ -0.57
CSHL1-208ENST00000558609 MRPL36Q9P0J6 103 aaKnown RBP11.51□□□□□ -0.57
CSHL1-208ENST00000558609 PUS1Q9Y606 427 aaKnown RBP eCLIP11.51□□□□□ -0.57
CSHL1-208ENST00000558609 SULT1A3P0DMM9 295 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 SULT1A4P0DMN0 295 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 IL7P13232 177 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 AKR1C4P17516 323 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 BMI1P35226 326 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 CMC4P56277 68 aaPredicted RBP11.5□□□□□ -0.57
CSHL1-208ENST00000558609 AP3S2P59780 193 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 BAK1Q16611 211 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 RGS21Q2M5E4 152 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 NMSQ5H8A3 153 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 IL17DQ8TAD2 202 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 OVOL2Q9BRP0 275 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 STARD9Q9P2P6 4700 aa11.5□□□□□ -0.57
CSHL1-208ENST00000558609 IGHV3OR16-13A0A075B7E8 117 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 TRAV30A0A087WSZ9 112 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 IGHV3-74A0A0B4J1X5 117 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 A0A0B4J2A0 478 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 A0A1B0GU03 582 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 RPS10-NUDT3A0A1W2PQS6 291 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 CEBPZOSA8MTT3 80 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 APOC4P55056 127 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 TOMM5Q8N4H5 51 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 RNASEH2CQ8TDP1 164 aaKnown RBP11.49□□□□□ -0.57
CSHL1-208ENST00000558609 DEDD2Q8WXF8 326 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 LYSTQ99698 3801 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 PRR13Q9NZ81 148 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 SHPKQ9UHJ6 478 aa11.49□□□□□ -0.57
CSHL1-208ENST00000558609 HYDINQ4G0P3 5121 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 CENPXA8MT69 81 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 UBE2CO00762 179 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 SCGB2A1O75556 95 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 IGKV1-17P01599 117 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 APOHP02749 345 aaPredicted RBP11.48□□□□□ -0.57
CSHL1-208ENST00000558609 ANXA3P12429 323 aa11.48□□□□□ -0.57
CSHL1-208ENST00000558609 CCR6P51684 374 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms