RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 FAM90A5PA8MXJ8 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A23PA8MXZ1 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 TMPRSS2O15393 492 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A15PP0C7V4 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A13PP0C7W8 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A14PP0C7W9 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A24PP0C7X0 464 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FRMD6-AS1P0C7T7 363 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 SMIM27A0A1W2PRY6 76 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 TAX1BP3O14907 124 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 CCL4P13236 92 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 SUMO2P61956 95 aaKnown RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 IGFL4Q6B9Z1 124 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 LINC01587Q99440 93 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 TRBV7-9A0A0J9YWB2 115 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 SPATA12Q7Z6I5 190 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF441Q8N8Z8 693 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 KLF14Q8TD94 323 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 CTHRC1Q96CG8 243 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 IGHV2-70DA0A0C4DH43 119 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 F2RL2O00254 374 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM74BQ9NUR3 256 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 SS18L1O75177 396 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 LYZL6O75951 148 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ANKRD26Q9UPS8 1709 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 C16orf97H3BN30 126 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM126AQ9H061 195 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 DUSP15Q9H1R2 295 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FBXL15Q9H469 300 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 IGHV2-26A0A0B4J1V2 119 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 PAX9P55771 341 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF146Q15072 292 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ASCL2Q99929 193 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 Q9H3A6 140 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 NDUFC2O95298 119 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 TRAV8-3A0A0A6YYJ7 113 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 BCL9LQ86UU0 1499 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 C9orf153Q5TBE3 101 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF645Q8N7E2 425 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 LY96Q9Y6Y9 160 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 TTC3P53804 2025 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ASPHD1Q5U4P2 390 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ATP5L2Q7Z4Y8 100 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 WNT9BO14905 357 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 DEFB125Q8N687 156 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ZNRF1Q8ND25 227 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 FAM90A2PQ658T7 463 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 S4R3C0 116 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM196Q5HYL7 178 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF296Q8WUU4 475 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 WDR83OSQ9Y284 106 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV1D-43A0A0B4J1Z2 117 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 MORN2Q502X0 79 aa3.07□□□□□ -1.92
ATXN3-248ENST00000558190 APOBEC3AP31941 199 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 RPL15P61313 204 aaKnown RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 CIARTQ8N365 385 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 ZNF625Q96I27 306 aaPredicted RBP3.07□□□□□ -1.92
ATXN3-248ENST00000558190 C14orf178Q8N769 122 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-248ENST00000558190 MRPL27Q9P0M9 148 aaKnown RBP3.06□□□□□ -1.92
ATXN3-248ENST00000558190 MYO9AB2RTY4 2548 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 CELA2BP08218 269 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-248ENST00000558190 PYYP10082 97 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 PCP2Q8IVA1 136 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 PGPEP1Q9NXJ5 209 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 SMAD7O15105 426 aaKnown RBP3.06□□□□□ -1.92
ATXN3-248ENST00000558190 FAM106AQ4KMX7 169 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 MYH1P12882 1939 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 PRR33A8MZF0 331 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 HLA-DRB4P13762 266 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 PTGDSP41222 190 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 DNM1P46Q6ZS02 220 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 HLA-DRB4X5D2U9 266 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 PMVKQ15126 192 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 VIRMAQ69YN4 1812 aaKnown RBP3.06□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM171Q8WVE6 324 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 LIME1Q9H400 295 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 HBDP02042 147 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 FGF11Q92914 225 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 SETD1AO15047 1707 aaKnown RBP3.06□□□□□ -1.92
ATXN3-248ENST00000558190 IGHV3-23P01764 117 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 LMO1P25800 156 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 RNF115Q9Y4L5 304 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 USP32Q8NFA0 1604 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 C12orf77C9JDV5 145 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 TEX43Q6ZNM6 134 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 TMEM101Q96IK0 257 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 CCL3P10147 92 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 PRDM14Q9GZV8 571 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 PPLO60437 1756 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 M0R381 172 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 MORN3Q6PF18 240 aaPredicted RBP3.06□□□□□ -1.92
ATXN3-248ENST00000558190 LIFP15018 202 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 LINC00596Q86U02 117 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 DKK2Q9UBU2 259 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV3D-11A0A0A0MRZ8 115 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 IGKV3-11P04433 115 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 MYH15Q9Y2K3 1946 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 GLRXP35754 106 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 FAM201AQ5SY85 155 aa3.06□□□□□ -1.92
ATXN3-248ENST00000558190 CDCP2Q5VXM1 449 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms