RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 TRAPPC2LQ9UL33 140 aa8.94□□□□□ -0.98
USP3-206ENST00000558157 DSPP15924 2871 aaKnown RBP8.94□□□□□ -0.98
USP3-206ENST00000558157 TMEM8BA6NDV4 472 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 PRSS46E5RG02 174 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 IGLV2-8P01709 118 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 HTR1DP28221 377 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 SCGB2A2Q13296 93 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 OR2K2Q8NGT1 345 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 MBD6Q96DN6 1003 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 IGF2BP2-AS1Q96M15 143 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 MAP1LC3CQ9BXW4 147 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 MED12LQ86YW9 2145 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 hDV102S1A0JD36 115 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 TMEM189A5PLL7 270 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 LIPFP07098 398 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 B4GALT1P15291 398 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 ZNF816Q0VGE8 651 aaPredicted RBP8.93□□□□□ -0.98
USP3-206ENST00000558157 C9orf106Q8NAJ2 232 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 NHLRC2Q8NBF2 726 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 MS4A5Q9H3V2 200 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 C12orf49Q9H741 205 aa8.93□□□□□ -0.98
USP3-206ENST00000558157 FNDC10F2Z333 226 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 SS18L1O75177 396 aaPredicted RBP8.92□□□□□ -0.98
USP3-206ENST00000558157 MFAP2P55001 183 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 CEACAM16Q2WEN9 425 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 Q6P435 159 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 BHLHA15Q7RTS1 189 aaPredicted RBP8.92□□□□□ -0.98
USP3-206ENST00000558157 H1FXQ92522 213 aaKnown RBP8.92□□□□□ -0.98
USP3-206ENST00000558157 LINC00470Q9BZP3 86 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 NPFFR1Q9GZQ6 430 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 SERTAD4Q9NUC0 356 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 HSPB8Q9UJY1 196 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 SVILO95425 2214 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 RTTNQ86VV8 2226 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 A0A087X0K7 114 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 A0A1W2PRE2 83 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 PSMB11A5LHX3 300 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 SYNGR1O43759 233 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 SMPD2O60906 423 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 RHBDL1O75783 438 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 PLP1P60201 277 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 RPS16P62249 146 aaKnown RBP8.92□□□□□ -0.98
USP3-206ENST00000558157 RPL8P62917 257 aaKnown RBP8.92□□□□□ -0.98
USP3-206ENST00000558157 GABRA6Q16445 453 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 TEPPQ6URK8 271 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 MRPL21Q7Z2W9 205 aaKnown RBP8.92□□□□□ -0.98
USP3-206ENST00000558157 KIR3DL3Q8N743 410 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 SNRNP40Q96DI7 357 aaKnown RBP8.92□□□□□ -0.98
USP3-206ENST00000558157 C19orf24Q9BVV8 132 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 CLEC5AQ9NY25 188 aa8.92□□□□□ -0.98
USP3-206ENST00000558157 SOX21Q9Y651 276 aaPredicted RBP8.92□□□□□ -0.98
USP3-206ENST00000558157 HIST1H1EP10412 219 aaKnown RBP8.91□□□□□ -0.98
USP3-206ENST00000558157 RPL30P62888 115 aaKnown RBP8.91□□□□□ -0.98
USP3-206ENST00000558157 GNG3P63215 75 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 C2orf91Q6ZV80 131 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 Q8IYB0 196 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 STPG3Q8N7X2 389 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 OR10AG1Q8NH19 301 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 VSTM2AQ8TAG5 236 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 DOCK7Q96N67 2140 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 HSD17B10Q99714 261 aaKnown RBP8.91□□□□□ -0.98
USP3-206ENST00000558157 FNDC4Q9H6D8 234 aaPredicted RBP8.91□□□□□ -0.98
USP3-206ENST00000558157 MPC1Q9Y5U8 109 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 FREM1Q5H8C1 2179 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 TLN1Q9Y490 2541 aaKnown RBP8.91□□□□□ -0.98
USP3-206ENST00000558157 PPIAL4EA0A075B759 164 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 PPIAL4CA0A0B4J2A2 164 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 IGHV1-24A0A0C4DH33 117 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 PPIAL4DF5H284 164 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 GNG7O60262 68 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 PPIAL4FP0DN26 164 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 AZU1P20160 251 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 FOXG1P55316 489 aaPredicted RBP8.91□□□□□ -0.98
USP3-206ENST00000558157 GUSBP1Q15486 140 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 LINC01545Q5VT33 79 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 NUP35Q8NFH5 326 aa8.91□□□□□ -0.98
USP3-206ENST00000558157 GTF3C1Q12789 2109 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 A0A1B0GXF2 115 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 C17orf98A8MV24 154 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 OR9G9P0C7N8 305 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 PATE4P0C8F1 98 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 MGST1P10620 155 aaKnown RBP8.9□□□□□ -0.98
USP3-206ENST00000558157 SEM1Q6ZVN7 128 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 RPRMLQ8N4K4 120 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 FAM57AQ8TBR7 257 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 URB1-AS1Q96HZ7 61 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 POM121L2Q96KW2 1035 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 PLSCR4Q9NRQ2 329 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 FAM215AQ9Y5M1 114 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 ITPR1Q14643 2758 aa8.9□□□□□ -0.98
USP3-206ENST00000558157 A0A0G2JLM5 398 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 J3QR89 54 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 VDAC2P45880 294 aaPredicted RBP8.9□□□□□ -0.99
USP3-206ENST00000558157 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 TAS2R45P59539 299 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 PRR20EP86478 221 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 PRR20CP86479 221 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 PRR20DP86480 221 aa8.9□□□□□ -0.99
USP3-206ENST00000558157 PRR20BP86481 221 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms