RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 GPHB5Q86YW7 130 aa19.54■□□□□ 0.72
SMAD6-202ENST00000557916 C2orf50Q96LR7 162 aa19.54■□□□□ 0.72
SMAD6-202ENST00000557916 NOTCH1P46531 2555 aa19.54■□□□□ 0.72
SMAD6-202ENST00000557916 RPS10-NUDT3A0A1W2PQS6 291 aa19.53■□□□□ 0.72
SMAD6-202ENST00000557916 SSSCA1O60232 199 aa19.53■□□□□ 0.72
SMAD6-202ENST00000557916 IFNA4P05014 189 aa19.53■□□□□ 0.72
SMAD6-202ENST00000557916 NPBWR1P48145 328 aa19.53■□□□□ 0.72
SMAD6-202ENST00000557916 RPP30P78346 268 aaKnown RBP19.53■□□□□ 0.72
SMAD6-202ENST00000557916 CHRDL1Q9BU40 450 aa19.53■□□□□ 0.72
SMAD6-202ENST00000557916 ELOVL1Q9BW60 279 aa19.53■□□□□ 0.72
SMAD6-202ENST00000557916 C15orf62A8K5M9 175 aa19.52■□□□□ 0.72
SMAD6-202ENST00000557916 SSNA1O43805 119 aa19.52■□□□□ 0.72
SMAD6-202ENST00000557916 MBPP02686 304 aaPredicted RBP19.52■□□□□ 0.72
SMAD6-202ENST00000557916 CTSGP08311 255 aa19.52■□□□□ 0.72
SMAD6-202ENST00000557916 FAM106AQ4KMX7 169 aa19.52■□□□□ 0.72
SMAD6-202ENST00000557916 OR9G4Q8NGQ1 327 aa19.52■□□□□ 0.72
SMAD6-202ENST00000557916 PAIP2BQ9ULR5 123 aaKnown RBP19.52■□□□□ 0.72
SMAD6-202ENST00000557916 GOSR2O14653 212 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 GNG7O60262 68 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 SAP30O75446 220 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 ADMP35318 185 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 RAB11AP62491 216 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 IGHV3-35A0A0C4DH35 117 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 C7orf66A4D0T2 115 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 NUPL2O15504 423 aaKnown RBP19.51■□□□□ 0.71
SMAD6-202ENST00000557916 SPANXN5Q5MJ07 72 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 ETFRF1Q6IPR1 90 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 OR4C12Q96R67 309 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 PSENENQ9NZ42 101 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 MRPL36Q9P0J6 103 aaKnown RBP19.51■□□□□ 0.71
SMAD6-202ENST00000557916 PEMTQ9UBM1 199 aa19.51■□□□□ 0.71
SMAD6-202ENST00000557916 ZNF320A2RRD8 509 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 H3BP45 60 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 SIX6O95475 246 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 SLC25A4P12235 298 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 INSL3P51460 131 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 BEAN1Q3B7T3 259 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 OR4X1Q8NH49 305 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 SMIM8Q96KF7 97 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 RAB40CQ96S21 281 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 RCL1Q9Y2P8 373 aaKnown RBP19.5■□□□□ 0.71
SMAD6-202ENST00000557916 STRAPQ9Y3F4 350 aaKnown RBP19.5■□□□□ 0.71
SMAD6-202ENST00000557916 ALG5Q9Y673 324 aa19.5■□□□□ 0.71
SMAD6-202ENST00000557916 LGALS9O00182 355 aa19.49■□□□□ 0.71
SMAD6-202ENST00000557916 WIPF1O43516 503 aa19.49■□□□□ 0.71
SMAD6-202ENST00000557916 CD69Q07108 199 aa19.49■□□□□ 0.71
SMAD6-202ENST00000557916 PRSS54Q6PEW0 395 aa19.49■□□□□ 0.71
SMAD6-202ENST00000557916 REC114Q7Z4M0 266 aa19.49■□□□□ 0.71
SMAD6-202ENST00000557916 ZNF436Q9C0F3 470 aaPredicted RBP19.49■□□□□ 0.71
SMAD6-202ENST00000557916 LSM5Q9Y4Y9 91 aaKnown RBP19.49■□□□□ 0.71
SMAD6-202ENST00000557916 CLN5O75503 358 aa19.48■□□□□ 0.71
SMAD6-202ENST00000557916 TMEM50AO95807 157 aa19.48■□□□□ 0.71
SMAD6-202ENST00000557916 PAX9P55771 341 aa19.48■□□□□ 0.71
SMAD6-202ENST00000557916 KPRPQ5T749 579 aaPredicted RBP19.48■□□□□ 0.71
SMAD6-202ENST00000557916 IL34Q6ZMJ4 242 aa19.48■□□□□ 0.71
SMAD6-202ENST00000557916 RND2P52198 227 aa19.47■□□□□ 0.71
SMAD6-202ENST00000557916 RELQ04864 619 aaPredicted RBP19.47■□□□□ 0.71
SMAD6-202ENST00000557916 IL15RAQ13261 267 aa19.47■□□□□ 0.71
SMAD6-202ENST00000557916 UNQ9165/PRO28630Q6UXU0 137 aa19.47■□□□□ 0.71
SMAD6-202ENST00000557916 SLC16A13Q7RTY0 426 aa19.47■□□□□ 0.71
SMAD6-202ENST00000557916 K7EPK0 472 aa19.46■□□□□ 0.71
SMAD6-202ENST00000557916 CSN3P07498 182 aa19.46■□□□□ 0.71
SMAD6-202ENST00000557916 GPX4P36969 197 aaPredicted RBP19.46■□□□□ 0.71
SMAD6-202ENST00000557916 TAS2R30P59541 319 aa19.46■□□□□ 0.71
SMAD6-202ENST00000557916 OXA1LQ15070 435 aa19.46■□□□□ 0.71
SMAD6-202ENST00000557916 TMEM116Q8NCL8 245 aa19.46■□□□□ 0.71
SMAD6-202ENST00000557916 NDUFA4O00483 81 aa19.45■□□□□ 0.7
SMAD6-202ENST00000557916 S100A10P60903 97 aa19.45■□□□□ 0.7
SMAD6-202ENST00000557916 L7N2F9 121 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 SCGB2A1O75556 95 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 VAMP2P63027 116 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 EGFEM1PQ0D2K5 195 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 CACNG8Q8WXS5 425 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 TMEM190Q8WZ59 177 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 NPIPB3Q92617 1050 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 ACY3Q96HD9 319 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 MGAT4CQ9UBM8 478 aa19.44■□□□□ 0.7
SMAD6-202ENST00000557916 TRAV30A0A087WSZ9 112 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 C2orf70A6NJV1 201 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 A8MWP6 167 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 TSC22D2O75157 780 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 CYCSP99999 105 aaKnown RBP19.43■□□□□ 0.7
SMAD6-202ENST00000557916 RAB32Q13637 225 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 SLC35E1Q96K37 410 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 NMES1Q9C002 83 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 SIGLEC8Q9NYZ4 499 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 UFC1Q9Y3C8 167 aa19.43■□□□□ 0.7
SMAD6-202ENST00000557916 H2BFSP57053 126 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 KRTAP10-11P60412 298 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 GAMTQ14353 236 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 TM4SF20Q53R12 229 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 ZNF414Q96IQ9 312 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 C20orf24Q9BUV8 137 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 TMEM213A2RRL7 107 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 PRSS46E5RG02 174 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 YIF1AO95070 293 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 FOLR2P14207 255 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 PVALBP20472 110 aaPredicted RBP19.42■□□□□ 0.7
SMAD6-202ENST00000557916 EDN2P20800 178 aa19.42■□□□□ 0.7
SMAD6-202ENST00000557916 OR10J1P30954 320 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms