RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 NOXA1Q86UR1 476 aa11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 BSCL2Q96G97 398 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 CHRDL1Q9BU40 450 aa11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 ALG5Q9Y673 324 aa11.35□□□□□ -0.59
VIPAS39-210ENST00000557466 IGHV3-35A0A0C4DH35 117 aa11.34□□□□□ -0.59
VIPAS39-210ENST00000557466 H3BP45 60 aa11.34□□□□□ -0.59
VIPAS39-210ENST00000557466 SIX6O95475 246 aa11.34□□□□□ -0.59
VIPAS39-210ENST00000557466 BEAN1Q3B7T3 259 aa11.34□□□□□ -0.59
VIPAS39-210ENST00000557466 C9orf66Q5T8R8 295 aa11.34□□□□□ -0.59
VIPAS39-210ENST00000557466 OR9G4Q8NGQ1 327 aa11.34□□□□□ -0.59
VIPAS39-210ENST00000557466 ZNF414Q96IQ9 312 aa11.34□□□□□ -0.59
VIPAS39-210ENST00000557466 TXN2Q99757 166 aa11.34□□□□□ -0.59
VIPAS39-210ENST00000557466 RPS10-NUDT3A0A1W2PQS6 291 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 SSNA1O43805 119 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 GNG7O60262 68 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 TMEM50AO95807 157 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 IFNA4P05014 189 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 CTSGP08311 255 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 PAX9P55771 341 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 CD69Q07108 199 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 IL15RAQ13261 267 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 SPANXN5Q5MJ07 72 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 SPSB3Q6PJ21 355 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 SLC16A13Q7RTY0 426 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 REC114Q7Z4M0 266 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 GPHB5Q86YW7 130 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 GPR61Q9BZJ8 451 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 GAR1Q9NY12 217 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 PSENENQ9NZ42 101 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 LSM5Q9Y4Y9 91 aaKnown RBP11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 NOTCH3Q9UM47 2321 aa11.33□□□□□ -0.6
VIPAS39-210ENST00000557466 K7EPK0 472 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 LGALS9O00182 355 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 WIPF1O43516 503 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 SAP30O75446 220 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 LY86O95711 162 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 EDN2P20800 178 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 NPBWR1P48145 328 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 RND2P52198 227 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 RAB11AP62491 216 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 OXA1LQ15070 435 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 KPRPQ5T749 579 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 PRSS54Q6PEW0 395 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 UNQ9165/PRO28630Q6UXU0 137 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 IL34Q6ZMJ4 242 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 OR4X1Q8NH49 305 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 SMIM8Q96KF7 97 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 RAB40CQ96S21 281 aa11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 ZNF436Q9C0F3 470 aaPredicted RBP11.32□□□□□ -0.6
VIPAS39-210ENST00000557466 A8MWP6 167 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 PRSS46E5RG02 174 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 NUPL2O15504 423 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 CLN5O75503 358 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 SLC25A4P12235 298 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 S100A10P60903 97 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 RPP30P78346 268 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 RAB32Q13637 225 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 FAM106AQ4KMX7 169 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 TMEM190Q8WZ59 177 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 ELOVL1Q9BW60 279 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 C11orf1Q9H5F2 150 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 PEMTQ9UBM1 199 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 MGAT4CQ9UBM8 478 aa11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 STRAPQ9Y3F4 350 aaKnown RBP11.31□□□□□ -0.6
VIPAS39-210ENST00000557466 ZNF320A2RRD8 509 aa11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 TMEM213A2RRL7 107 aa11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 CCNKO75909 580 aa11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 CSN3P07498 182 aa11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 H2BFSP57053 126 aa11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 TAS2R30P59541 319 aa11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 WDR89Q96FK6 387 aaPredicted RBP11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 ACY3Q96HD9 319 aa11.3□□□□□ -0.6
VIPAS39-210ENST00000557466 IGHV3OR16-8A0A075B7F1 116 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 C2orf70A6NJV1 201 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 PMS2P5A8MQ11 134 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 L7N2F9 121 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 NDUFA4O00483 81 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 TSC22D2O75157 780 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 IGLC1P0CG04 106 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 INSL3P51460 131 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 VAMP2P63027 116 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 RELQ04864 619 aaPredicted RBP11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 EGFEM1PQ0D2K5 195 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 TIGITQ495A1 244 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 TMEM14EPQ6UXP3 125 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 ADAMTSL5Q6ZMM2 481 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 CACNG8Q8WXS5 425 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 NPIPB3Q92617 1050 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 NMES1Q9C002 83 aa11.29□□□□□ -0.6
VIPAS39-210ENST00000557466 IGKV1-17P01599 117 aa11.28□□□□□ -0.6
VIPAS39-210ENST00000557466 METTL15P1P0C7V9 234 aa11.28□□□□□ -0.6
VIPAS39-210ENST00000557466 GPX4P36969 197 aaPredicted RBP11.28□□□□□ -0.6
VIPAS39-210ENST00000557466 KRTAP10-11P60412 298 aa11.28□□□□□ -0.6
VIPAS39-210ENST00000557466 GAMTQ14353 236 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms