RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 MOB4Q9Y3A3 225 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 TIMM9Q9Y5J7 89 aa9.78□□□□□ -0.84
SHMT2-230ENST00000557427 C15orf61A6NNL5 157 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 M0QZK8 103 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 APOC3P02656 99 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 IL6RP08887 468 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-230ENST00000557427 CT45A6P0DMU7 189 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 CT45A5P0DMU8 189 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 CT45A7P0DMV0 189 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 ZNF137PP52743 207 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.85
SHMT2-230ENST00000557427 SERF2P84101 59 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
SHMT2-230ENST00000557427 RUNX1Q01196 453 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 SBSPONQ8IVN8 264 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 OR10P1Q8NGE3 313 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 EAF1Q96JC9 268 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-230ENST00000557427 TMEM147Q9BVK8 224 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 SEC11CQ9BY50 192 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 WDR61Q9GZS3 305 aaKnown RBP9.77□□□□□ -0.85
SHMT2-230ENST00000557427 SLC35D1Q9NTN3 355 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 LINC00527Q9UJ94 153 aa9.77□□□□□ -0.85
SHMT2-230ENST00000557427 FOXA2Q9Y261 457 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-230ENST00000557427 SCO1O75880 301 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 IFNA17P01571 189 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 HBE1P02100 147 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 APOA2P02652 100 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 OR2B8PP59922 312 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 AKR1C1Q04828 323 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 PEA15Q15121 130 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 SSX9Q7RTT3 188 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 TGIF2LXQ8IUE1 241 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 OR2T10Q8NGZ9 312 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 ST6GALNAC6Q969X2 333 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 RHOVQ96L33 236 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 SCRT1Q9BWW7 348 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 TMEM14BQ9NUH8 114 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 RFNGQ9Y644 331 aa9.76□□□□□ -0.85
SHMT2-230ENST00000557427 TRAV1-1A0A0B4J248 108 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 RBMY1BA6NDE4 496 aaKnown RBP9.75□□□□□ -0.85
SHMT2-230ENST00000557427 RBMY1EA6NEQ0 496 aaKnown RBP9.75□□□□□ -0.85
SHMT2-230ENST00000557427 LINC01548A6NM66 108 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 C15orf62A8K5M9 175 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 F8W036 122 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 RBMY1DP0C7P1 496 aaKnown RBP9.75□□□□□ -0.85
SHMT2-230ENST00000557427 ADCYAP1P18509 176 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 FHITP49789 147 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 HSPE1P61604 102 aaKnown RBP9.75□□□□□ -0.85
SHMT2-230ENST00000557427 GUK1Q16774 197 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 OR8G2PQ6IF36 304 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 SPSB3Q6PJ21 355 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 ZNF329Q86UD4 541 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 VKORC1L1Q8N0U8 176 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 SVBPQ8N300 66 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 C5orf56Q8N8D9 126 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 OR5AN1Q8NGI8 311 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 OSR1Q8TAX0 266 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-230ENST00000557427 NOL4LQ96MY1 436 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-230ENST00000557427 PBDC1Q9BVG4 233 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 TMEM231Q9H6L2 316 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 BET1LQ9NYM9 111 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 PRNDQ9UKY0 176 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 ZNF257Q9Y2Q1 563 aa9.75□□□□□ -0.85
SHMT2-230ENST00000557427 PLECQ15149 4684 aaKnown RBP9.74□□□□□ -0.85
SHMT2-230ENST00000557427 TRAV3A0A0B4J244 114 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 UBE2L5PA0A1B0GUS4 154 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 UPK2O00526 184 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 AGPAT2O15120 278 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 MOSP00540 346 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 CD1BP29016 333 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 RAB2AP61019 212 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 DEFA5Q01523 94 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 EBI3Q14213 229 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 KHDC1LQ5JSQ8 128 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 PDPNQ86YL7 162 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 SUN5Q8TC36 379 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 NABP2Q9BQ15 211 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 RSG1Q9BU20 258 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 MCRIP2Q9BUT9 160 aaKnown RBP9.74□□□□□ -0.85
SHMT2-230ENST00000557427 GGACTQ9BVM4 153 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 MRPL20Q9BYC9 149 aaKnown RBP9.74□□□□□ -0.85
SHMT2-230ENST00000557427 KIAA1456Q9P272 454 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 FBXO7Q9Y3I1 522 aa9.74□□□□□ -0.85
SHMT2-230ENST00000557427 PSMB11A5LHX3 300 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 H0YJW9 148 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 SOX15O60248 233 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 SFTA3P0C7M3 94 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 TMEM41BQ5BJD5 291 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 C18orf65Q6ZTR6 163 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 SLC35E3Q7Z769 313 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 OR4X2Q8NGF9 303 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 MBD3L1Q8WWY6 194 aa9.73□□□□□ -0.85
SHMT2-230ENST00000557427 RITA1Q96K30 269 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms