RNA–Protein interactions for RNA: ENST00000557400.5

NEDD1-210, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 604 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-210ENST00000557400 DNAH6Q9C0G6 4158 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 A0A0B4J293 547 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 KNCNA6PVL3 124 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 CLN5O75503 358 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 SCGB2A1O75556 95 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 IFNA17P01571 189 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 IGKV1-5P01602 117 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 RNASE2P10153 161 aaKnown RBP12.37□□□□□ -0.43
NEDD1-210ENST00000557400 P2RY1P47900 373 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 AKR1C2P52895 323 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 SUB1P53999 127 aaKnown RBP eCLIP12.37□□□□□ -0.43
NEDD1-210ENST00000557400 DCANP1Q8TF63 244 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 NARS2Q96I59 477 aaKnown RBP12.37□□□□□ -0.43
NEDD1-210ENST00000557400 RNF126Q9BV68 326 aa12.37□□□□□ -0.43
NEDD1-210ENST00000557400 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-210ENST00000557400 ATP6V1G2O95670 118 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 P0C879 139 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 OPRK1P41145 380 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 PPP5CP53041 499 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 RND3P61587 244 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 KCTD21Q4G0X4 260 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 SNX29P2Q8IUI4 249 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 OR4X1Q8NH49 305 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 TMEM230Q96A57 120 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 PDCD10Q9BUL8 212 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 FNDC4Q9H6D8 234 aaPredicted RBP12.36□□□□□ -0.43
NEDD1-210ENST00000557400 MRPL36Q9P0J6 103 aaKnown RBP12.36□□□□□ -0.43
NEDD1-210ENST00000557400 TBC1D24Q9ULP9 559 aa12.36□□□□□ -0.43
NEDD1-210ENST00000557400 SMIM31A0A1B0GVY4 71 aa12.35□□□□□ -0.43
NEDD1-210ENST00000557400 ATG12O94817 140 aa12.35□□□□□ -0.43
NEDD1-210ENST00000557400 PGAM2P15259 253 aa12.35□□□□□ -0.43
NEDD1-210ENST00000557400 RPL5P46777 297 aaKnown RBP12.35□□□□□ -0.43
NEDD1-210ENST00000557400 HOXA1P49639 335 aaPredicted RBP12.35□□□□□ -0.43
NEDD1-210ENST00000557400 LSM3P62310 102 aaKnown RBP12.35□□□□□ -0.43
NEDD1-210ENST00000557400 CSNK1G2-AS1Q8NCQ2 148 aa12.35□□□□□ -0.43
NEDD1-210ENST00000557400 ZNF486Q96H40 463 aaPredicted RBP12.35□□□□□ -0.43
NEDD1-210ENST00000557400 CLEC5AQ9NY25 188 aa12.35□□□□□ -0.43
NEDD1-210ENST00000557400 M0QYG6 137 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 IGKV1-17P01599 117 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 APOA1P02647 267 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 AMBPP02760 352 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 PI3P19957 117 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 ETV6P41212 452 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 EIF2B2P49770 351 aaKnown RBP12.34□□□□□ -0.43
NEDD1-210ENST00000557400 TP53RKQ96S44 253 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 ENY2Q9NPA8 101 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 COMMD3Q9UBI1 195 aa12.34□□□□□ -0.43
NEDD1-210ENST00000557400 A0A1B0GVY2 172 aa12.33□□□□□ -0.44
NEDD1-210ENST00000557400 PIGPP57054 158 aa12.33□□□□□ -0.44
NEDD1-210ENST00000557400 MLANAQ16655 118 aa12.33□□□□□ -0.44
NEDD1-210ENST00000557400 YIPF6Q96EC8 236 aa12.33□□□□□ -0.44
NEDD1-210ENST00000557400 CELA1Q9UNI1 258 aa12.33□□□□□ -0.44
NEDD1-210ENST00000557400 TRAV30A0A087WSZ9 112 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 DEFB131BA0A096LNP1 70 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 HELTA6NFD8 242 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 DHRS2Q13268 280 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 TRIM16LQ309B1 348 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 C12orf74Q32Q52 190 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 BSXQ3C1V8 233 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 TIGITQ495A1 244 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 PSMG4Q5JS54 123 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 LHFPL1Q86WI0 220 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 RAB40CQ96S21 281 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 U3KQE9 123 aa12.32□□□□□ -0.44
NEDD1-210ENST00000557400 RPS10-NUDT3A0A1W2PQS6 291 aa12.31□□□□□ -0.44
NEDD1-210ENST00000557400 P0DMU3 169 aa12.31□□□□□ -0.44
NEDD1-210ENST00000557400 FAM231AP0DMU4 169 aa12.31□□□□□ -0.44
NEDD1-210ENST00000557400 FAM231CP0DMU5 169 aa12.31□□□□□ -0.44
NEDD1-210ENST00000557400 AP2S1P53680 142 aaPredicted RBP12.31□□□□□ -0.44
NEDD1-210ENST00000557400 NUTF2P61970 127 aaKnown RBP12.31□□□□□ -0.44
NEDD1-210ENST00000557400 RNASE10Q5GAN6 216 aaKnown RBP12.31□□□□□ -0.44
NEDD1-210ENST00000557400 ARRDC1Q8N5I2 433 aa12.31□□□□□ -0.44
NEDD1-210ENST00000557400 POM121L12Q8N7R1 296 aa12.31□□□□□ -0.44
NEDD1-210ENST00000557400 GLMPQ8WWB7 406 aa12.31□□□□□ -0.44
NEDD1-210ENST00000557400 RRNAD1Q96FB5 475 aaKnown RBP12.31□□□□□ -0.44
NEDD1-210ENST00000557400 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
NEDD1-210ENST00000557400 A0A0G2JRQ6 117 aa12.3□□□□□ -0.44
NEDD1-210ENST00000557400 HNRNPCP07910 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
NEDD1-210ENST00000557400 MED14OSP0DP75 135 aa12.3□□□□□ -0.44
NEDD1-210ENST00000557400 SP6Q3SY56 376 aa12.3□□□□□ -0.44
NEDD1-210ENST00000557400 C16orf54Q6UWD8 224 aa12.3□□□□□ -0.44
NEDD1-210ENST00000557400 ZNF767PQ75MW2 155 aa12.3□□□□□ -0.44
NEDD1-210ENST00000557400 RNASE11Q8TAA1 199 aaKnown RBP12.3□□□□□ -0.44
NEDD1-210ENST00000557400 NDUFAF3Q9BU61 184 aa12.3□□□□□ -0.44
NEDD1-210ENST00000557400 VCX3AQ9NNX9 186 aa12.3□□□□□ -0.44
NEDD1-210ENST00000557400 COPZ2Q9P299 210 aa12.3□□□□□ -0.44
NEDD1-210ENST00000557400 IGLC1P0CG04 106 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 ELK1P19419 428 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 UCP1P25874 307 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 SPCS3P61009 180 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 SNRPD3P62318 126 aaKnown RBP12.29□□□□□ -0.44
NEDD1-210ENST00000557400 CCDC71LQ8N9Z2 235 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 OR1S2Q8NGQ3 325 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 Q8WTZ3 238 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 KLK11Q9UBX7 282 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 FAT2Q9NYQ8 4349 aa12.29□□□□□ -0.44
NEDD1-210ENST00000557400 PRSS29PA6NIE9 313 aa12.28□□□□□ -0.44
NEDD1-210ENST00000557400 FAM90A26D6RGX4 464 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms