RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 PTPRDP23468 1912 aa6.99□□□□□ -1.29
CHD8-213ENST00000557364 SAA1P0DJI8 122 aaPredicted RBP6.98□□□□□ -1.29
CHD8-213ENST00000557364 ZNF79Q15937 498 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 CENPWQ5EE01 88 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 MDS2Q8NDY4 140 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 OR5AC2Q9NZP5 309 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 TMEM178BH3BS89 294 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 M0R381 172 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 HTN3P15516 51 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 NSUN5P1Q3KNT7 163 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 OR9G4Q8NGQ1 327 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 ARFGEF3Q5TH69 2177 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 TRAV34A0A0B4J273 112 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 STAG3L3P0CL85 134 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 SEC11AP67812 179 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 SIGLEC15Q6ZMC9 328 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 FER1L6-AS1Q8NA97 138 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 OR5AN1Q8NGI8 311 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 AKIRIN1Q9H9L7 192 aaPredicted RBP6.98□□□□□ -1.29
CHD8-213ENST00000557364 PRCDQ00LT1 54 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 ORMDL3Q8N138 153 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 TMEM86BQ8N661 226 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 OR13C6PQ8NH95 151 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 AICDAQ9GZX7 198 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 TIMM23O14925 209 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 NBL1P41271 181 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 VMO1Q7Z5L0 202 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 USF3Q68DE3 2245 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 CD8AP01732 235 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 RPL24P83731 157 aaKnown RBP6.98□□□□□ -1.29
CHD8-213ENST00000557364 GCM2O75603 506 aaPredicted RBP6.98□□□□□ -1.29
CHD8-213ENST00000557364 KLK2P20151 261 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 OR10J3Q5JRS4 329 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 NHLRC3Q5JS37 347 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 BEND2Q8NDZ0 799 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 ZNF414Q96IQ9 312 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 SLC25A15Q9Y619 301 aa6.98□□□□□ -1.29
CHD8-213ENST00000557364 IGHV2-26A0A0B4J1V2 119 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 C1QTNF9BB2RNN3 333 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 CD7P09564 240 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 CRYGSP22914 178 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 ANAPC1Q9H1A4 1944 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 PLXND1Q9Y4D7 1925 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 IGKV3OR2-268A0A0C4DH90 116 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 CSRP3P50461 194 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 DNLZQ5SXM8 178 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 CELA3BP08861 270 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 ORMDL2Q53FV1 153 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 VCX2Q9H322 139 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 RPP21Q9H633 154 aaKnown RBP6.97□□□□□ -1.29
CHD8-213ENST00000557364 ST20Q9HBF5 79 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 UQCR10Q9UDW1 63 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 A0A0G2JNJ9 132 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 ZNF415Q09FC8 603 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 Q9H3A6 140 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 Q9UFV3 132 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 MYLKQ15746 1914 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 THSD7BQ9C0I4 1608 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 RPUSD1Q9UJJ7 312 aaKnown RBP6.97□□□□□ -1.29
CHD8-213ENST00000557364 SP5Q6BEB4 398 aaPredicted RBP6.97□□□□□ -1.29
CHD8-213ENST00000557364 SLC25A34Q6PIV7 304 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 DPH3P1Q9H4G8 78 aa6.97□□□□□ -1.29
CHD8-213ENST00000557364 LOC107984156A0A0G2JMH3 177 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 TMEM170BQ5T4T1 132 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 ARL17AQ8IVW1 177 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 PARLQ9H300 379 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 K7ERU9 68 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 IGHV1-8P0DP01 117 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 TPTE2P1Q5T6R2 138 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 LCN12Q6JVE5 192 aa6.96□□□□□ -1.29
CHD8-213ENST00000557364 A0A087WX48 190 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.96□□□□□ -1.3
CHD8-213ENST00000557364 RAMP1O60894 148 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 DEFB121Q5J5C9 76 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 COL5A1-AS1Q5SY13 56 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 MUC6Q6W4X9 2439 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 INSP01308 110 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 NCMAPQ5T1S8 102 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 C9orf139Q6ZV77 190 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 FLVCR1-AS1Q8TAF5 88 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 NXT2Q9NPJ8 142 aaKnown RBP6.96□□□□□ -1.3
CHD8-213ENST00000557364 DEPPQ9NTK1 212 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 A0A087X0M5 115 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 A0A1B0GX30 115 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 IGHV3-11P01762 117 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 BEX4Q9NWD9 120 aaPredicted RBP6.96□□□□□ -1.3
CHD8-213ENST00000557364 PIN1P1O15428 100 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 PSCAO43653 123 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 EMP1P54849 157 aa6.96□□□□□ -1.3
CHD8-213ENST00000557364 C17orf98A8MV24 154 aa6.95□□□□□ -1.3
CHD8-213ENST00000557364 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
CHD8-213ENST00000557364 TMEM136Q6ZRR5 245 aa6.95□□□□□ -1.3
CHD8-213ENST00000557364 MARVELD3Q96A59 401 aa6.95□□□□□ -1.3
CHD8-213ENST00000557364 MED12Q93074 2177 aa6.95□□□□□ -1.3
CHD8-213ENST00000557364 A0A1W2PRE2 83 aa6.95□□□□□ -1.3
CHD8-213ENST00000557364 IGFBP3P17936 291 aaPredicted RBP6.95□□□□□ -1.3
CHD8-213ENST00000557364 LINC00477Q96M19 166 aa6.95□□□□□ -1.3
CHD8-213ENST00000557364 RNASE1P07998 156 aaKnown RBP6.95□□□□□ -1.3
CHD8-213ENST00000557364 MSMBP08118 114 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms