RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 OR2A7Q96R45 310 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 SULT4A1Q9BR01 284 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 GINS4Q9BRT9 223 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 FAAP24Q9BTP7 215 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 PPA2Q9H2U2 334 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 TMEM165Q9HC07 324 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 TAAR3PQ9P1P4 343 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 MYEF2Q9P2K5 600 aaKnown RBP2.14□□□□□ -2.07
VRK1-207ENST00000557352 ALG5Q9Y673 324 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 MAP1AP78559 2803 aaPredicted RBP2.14□□□□□ -2.07
VRK1-207ENST00000557352 NAV2Q8IVL1 2488 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 TLN2Q9Y4G6 2542 aa2.14□□□□□ -2.07
VRK1-207ENST00000557352 TRAV6A0A075B6T7 132 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 IGKV1D-8A0A087WSZ0 117 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 MEIKINA0A087WXM9 373 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 A0A096LNJ9 63 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 TRAV38-1A0A0B4J264 116 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 C9orf170A2RU37 121 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 OR5H14A6NHG9 310 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 CRYM-AS1A6NIL9 109 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 RFPL4AA6NLU0 287 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 HMSDA8MTL9 139 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 E7EQL1 145 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 RFPL4AL1F8VTS6 287 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 K7EQM0 130 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 FABP7O15540 132 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 CCNKO75909 580 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 PPYP01298 95 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 CD8AP01732 235 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 C1QBP02746 253 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 OR4E1P0C645 316 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 OR5H8P0DN80 308 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 CGB3P0DN86 165 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 CGB7P0DN87 165 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 SLC25A6P12236 298 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 GZMHP20718 246 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 RPL13AP40429 203 aaKnown RBP2.13□□□□□ -2.07
VRK1-207ENST00000557352 ARPC4P59998 168 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 TSPAN5P62079 268 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 SNRPD2P62316 118 aaKnown RBP2.13□□□□□ -2.07
VRK1-207ENST00000557352 MEF2CQ06413 473 aaPredicted RBP2.13□□□□□ -2.07
VRK1-207ENST00000557352 FGL1Q08830 312 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 DHRS2Q13268 280 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 TMEM155Q4W5P6 130 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 OR52W1Q6IF63 320 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 SLC25A24Q6NUK1 477 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 NCCRP1Q6ZVX7 275 aaPredicted RBP2.13□□□□□ -2.07
VRK1-207ENST00000557352 LYG2Q86SG7 212 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 LRP11Q86VZ4 500 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 MUC15Q8N387 334 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 PNKDQ8N490 385 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 DRAXINQ8NBI3 349 aaPredicted RBP2.13□□□□□ -2.07
VRK1-207ENST00000557352 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.13□□□□□ -2.07
VRK1-207ENST00000557352 OR2Z1Q8NG97 314 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 OR4S1Q8NGB4 309 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 OR52M1Q8NGK5 317 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 ZNF596Q8TC21 504 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 LRRC29Q8WV35 223 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 TMEM230Q96A57 120 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 GALMQ96C23 342 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 ABHD14BQ96IU4 210 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 HYLS1Q96M11 299 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 PHB2Q99623 299 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 SUCNR1Q9BXA5 334 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 C1QTNF6Q9BXI9 259 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 MED28Q9H204 178 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 OR51B6Q9H340 312 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 RANBP3Q9H6Z4 567 aaPredicted RBP2.13□□□□□ -2.07
VRK1-207ENST00000557352 RAB18Q9NP72 206 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 CBLN4Q9NTU7 201 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 TMEM106BQ9NUM4 274 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 SIGLEC8Q9NYZ4 499 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 CACFD1Q9UGQ2 172 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 KIF25Q9UIL4 384 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 JPT1Q9UK76 154 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 LINC00312Q9Y6C7 94 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 TENM4Q6N022 2769 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 MYO9AB2RTY4 2548 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 ZANQ9Y493 2812 aa2.13□□□□□ -2.07
VRK1-207ENST00000557352 TEX15Q9BXT5 2789 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 CCDC168Q8NDH2 2452 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ITPR3Q14573 2671 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 PPIAL4EA0A075B759 164 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 IGKV1-6A0A0C4DH72 117 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 IGHV1-69-2A0A0G2JMI3 117 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 LINC00854A0A1B0GVQ3 168 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ODAMA1E959 279 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 MEIS3P1A6NDR6 274 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 PCP4L1A6NKN8 68 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 ZNF729A6NN14 1252 aaPredicted RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 H0Y980 276 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 C15orf65H3BRN8 121 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 GPR31O00270 319 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 RBFOX2O43251 390 aaKnown RBP eCLIP2.12□□□□□ -2.07
VRK1-207ENST00000557352 YPEL1O60688 119 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 RP2O75695 350 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 SFT2D2O95562 160 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 CDS2O95674 445 aa2.12□□□□□ -2.07
VRK1-207ENST00000557352 HLA-AP01891 365 aaKnown RBP2.12□□□□□ -2.07
VRK1-207ENST00000557352 PMP2P02689 132 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms