RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FLVCR2Q9UPI3 526 aa9.47□□□□□ -0.89
SLIRP-209ENST00000557342 DNAH3Q8TD57 4116 aa9.46□□□□□ -0.89
SLIRP-209ENST00000557342 FAM90A26D6RGX4 464 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 K7EMT4 169 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 PITX3O75364 302 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 MED6O75586 246 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 NXPH3O95157 252 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 IGHV3-48P01763 117 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 HOXB5P09067 269 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 C8orf88P0DMB2 117 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 NPY1RP25929 384 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 ADMP35318 185 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 ATP5IP56385 69 aaPredicted RBP9.46□□□□□ -0.9
SLIRP-209ENST00000557342 CD69Q07108 199 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 DHRS2Q13268 280 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 DEFB114Q30KQ6 69 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 CD300EQ496F6 205 aaPredicted RBP9.46□□□□□ -0.9
SLIRP-209ENST00000557342 C4orf46Q504U0 113 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 TM4SF20Q53R12 229 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 ADAMTSL5Q6ZMM2 481 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 NRARPQ7Z6K4 114 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 LYG2Q86SG7 212 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 GTSCR1Q86UQ5 136 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 UXS1Q8NBZ7 420 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 ENKURQ8TC29 256 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 DTD1Q8TEA8 209 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 B9D2Q9BPU9 175 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 C20orf85Q9H1P6 137 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 RBKSQ9H477 322 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 DAZ1Q9NQZ3 744 aaKnown RBP9.46□□□□□ -0.9
SLIRP-209ENST00000557342 U3KQ87 197 aa9.46□□□□□ -0.9
SLIRP-209ENST00000557342 TRAV30A0A087WSZ9 112 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 FAM240BA0A1B0GVZ2 78 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 C15orf62A8K5M9 175 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 IFNA10P01566 189 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 IFNA21P01568 189 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 TCRBP04435 133 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 ANXA7P20073 488 aaKnown RBP9.45□□□□□ -0.9
SLIRP-209ENST00000557342 GGNBP1Q5YKI7 109 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 ETFRF1Q6IPR1 90 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 OR4X1Q8NH49 305 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 CACNG8Q8WXS5 425 aa9.45□□□□□ -0.9
SLIRP-209ENST00000557342 IZUMO1RA6ND01 250 aa9.44□□□□□ -0.9
SLIRP-209ENST00000557342 CLN5O75503 358 aa9.44□□□□□ -0.9
SLIRP-209ENST00000557342 YIF1AO95070 293 aa9.44□□□□□ -0.9
SLIRP-209ENST00000557342 TMEM50AO95807 157 aa9.44□□□□□ -0.9
SLIRP-209ENST00000557342 SLC25A4P12235 298 aa9.44□□□□□ -0.9
SLIRP-209ENST00000557342 EDN2P20800 178 aa9.44□□□□□ -0.9
SLIRP-209ENST00000557342 CIB3Q96Q77 187 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-209ENST00000557342 C20orf24Q9BUV8 137 aa9.44□□□□□ -0.9
SLIRP-209ENST00000557342 FNDC4Q9H6D8 234 aaPredicted RBP9.44□□□□□ -0.9
SLIRP-209ENST00000557342 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
SLIRP-209ENST00000557342 RPP30P78346 268 aaKnown RBP9.43□□□□□ -0.9
SLIRP-209ENST00000557342 GUCA2BQ16661 112 aa9.43□□□□□ -0.9
SLIRP-209ENST00000557342 BTNL8Q6UX41 500 aa9.43□□□□□ -0.9
SLIRP-209ENST00000557342 ZNF600Q6ZNG1 722 aa9.43□□□□□ -0.9
SLIRP-209ENST00000557342 Q8N1Y9 231 aa9.43□□□□□ -0.9
SLIRP-209ENST00000557342 OR10C1Q96KK4 312 aa9.43□□□□□ -0.9
SLIRP-209ENST00000557342 GINS3Q9BRX5 216 aa9.43□□□□□ -0.9
SLIRP-209ENST00000557342 MLXQ9UH92 298 aa9.43□□□□□ -0.9
SLIRP-209ENST00000557342 PRKDCP78527 4128 aaKnown RBP9.42□□□□□ -0.9
SLIRP-209ENST00000557342 TRAV6A0A075B6T7 132 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 ZNF785A8K8V0 405 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 SYNGR2O43760 224 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 ADAP1O75689 374 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 NHLRC4P0CG21 123 aaPredicted RBP9.42□□□□□ -0.9
SLIRP-209ENST00000557342 BMI1P35226 326 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 RAB11AP62491 216 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 MLANAQ16655 118 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 LAMTOR1Q6IAA8 161 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 Q6ZNX1 250 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
SLIRP-209ENST00000557342 OR1S2Q8NGQ3 325 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 MITD1Q8WV92 249 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 MARVELD1Q9BSK0 173 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 NUDT15Q9NV35 164 aa9.42□□□□□ -0.9
SLIRP-209ENST00000557342 TRAV14DV4A0A0A6YYC5 116 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 A8MZ25 164 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 IFNA4P05014 189 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 H2AFB2P0C5Z0 115 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 CD81P60033 236 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 PRSS54Q6PEW0 395 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 TOMM20LQ6UXN7 152 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 TMEM61Q8N0U2 210 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 TMEM116Q8NCL8 245 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 TMEM170AQ8WVE7 144 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 WDR89Q96FK6 387 aaPredicted RBP9.41□□□□□ -0.9
SLIRP-209ENST00000557342 NEURL2Q9BR09 285 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 MRPL36Q9P0J6 103 aaKnown RBP9.41□□□□□ -0.9
SLIRP-209ENST00000557342 SMPXQ9UHP9 88 aa9.41□□□□□ -0.9
SLIRP-209ENST00000557342 PUS1Q9Y606 427 aaKnown RBP eCLIP9.41□□□□□ -0.9
SLIRP-209ENST00000557342 IGHV3OR16-8A0A075B7F1 116 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 WRBO00258 174 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 ZNF207O43670 478 aaKnown RBP9.4□□□□□ -0.9
SLIRP-209ENST00000557342 FRMD6-AS1P0C7T7 363 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 IGHV4-30-4P0DP06 118 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 IAPPP10997 89 aa9.4□□□□□ -0.9
SLIRP-209ENST00000557342 GPX4P36969 197 aaPredicted RBP9.4□□□□□ -0.9
SLIRP-209ENST00000557342 NKX2-1P43699 371 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms