RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 KIR2DL5BA0A0G2JPC4 375 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 GABARAPH6UMI1 98 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 DEFB4AO15263 64 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 RGS5O15539 181 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 BMI1P35226 326 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 TAS2R19P59542 299 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 DEFB131AP59861 70 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 TIGITQ495A1 244 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 GSG1LQ6UXU4 331 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 ZNF600Q6ZNG1 722 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 CLVS1Q8IUQ0 354 aaPredicted RBP7.99□□□□□ -1.13
SYNE2-227ENST00000557307 SELENOHQ8IZQ5 122 aaKnown RBP7.99□□□□□ -1.13
SYNE2-227ENST00000557307 KIR2DL5AQ8N109 375 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 STPG3Q8N7X2 389 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 KIR2DL5BQ8NHK3 375 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 DYNC2LI1Q8TCX1 351 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 SMIM4Q8WVI0 70 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 GPR146Q96CH1 333 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 MRPS26Q9BYN8 205 aaKnown RBP7.99□□□□□ -1.13
SYNE2-227ENST00000557307 TMEM222Q9H0R3 208 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 NAA60Q9H7X0 242 aa7.99□□□□□ -1.13
SYNE2-227ENST00000557307 UBE2CO00762 179 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 CDS2O95674 445 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 LY6G6CO95867 125 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 IGKV1-17P01599 117 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 TBPP20226 339 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 OPRK1P41145 380 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 NANOS2P60321 138 aaKnown RBP7.98□□□□□ -1.13
SYNE2-227ENST00000557307 RBMS2Q15434 407 aaKnown RBP7.98□□□□□ -1.13
SYNE2-227ENST00000557307 AARDQ4LEZ3 155 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 GPR141Q7Z602 305 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 CCDC71LQ8N9Z2 235 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 DUSP18Q8NEJ0 188 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 CACNG5Q9UF02 275 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 DNAH2Q9P225 4427 aa7.98□□□□□ -1.13
SYNE2-227ENST00000557307 TEX13DA0A0J9YY54 714 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-227ENST00000557307 CRYM-AS1A6NIL9 109 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 CLN5O75503 358 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 GIG44P09565 113 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-227ENST00000557307 C4BPBP20851 252 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 SNCAP37840 140 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 NPBWR1P48145 328 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 IL18Q14116 193 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 TMEM268Q5VZI3 342 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 CEMP1Q6PRD7 247 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-227ENST00000557307 RPP25LQ8N5L8 163 aaKnown RBP7.97□□□□□ -1.13
SYNE2-227ENST00000557307 OR51S1Q8NGJ8 323 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 RNASE11Q8TAA1 199 aaKnown RBP7.97□□□□□ -1.13
SYNE2-227ENST00000557307 ZFAND1Q8TCF1 268 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 GINS3Q9BRX5 216 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 CSTL1Q9H114 145 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 GPR132Q9UNW8 380 aa7.97□□□□□ -1.13
SYNE2-227ENST00000557307 ANKRD20A5PA0PJZ0 165 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 KNCNA6PVL3 124 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 K7EQG2 157 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 DEDDO75618 318 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 CA1P00915 261 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-227ENST00000557307 IGLC1P0CG04 106 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 CRYBB3P26998 211 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 RND2P52198 227 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 SUPT4H1P63272 117 aaKnown RBP7.96□□□□□ -1.14
SYNE2-227ENST00000557307 TMEM187Q14656 261 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 USF2Q15853 346 aaPredicted RBP7.96□□□□□ -1.14
SYNE2-227ENST00000557307 PRSS54Q6PEW0 395 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 STXBP6Q8NFX7 210 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 OR4X1Q8NH49 305 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 RBPMSQ93062 196 aaKnown RBP7.96□□□□□ -1.14
SYNE2-227ENST00000557307 RRNAD1Q96FB5 475 aaKnown RBP7.96□□□□□ -1.14
SYNE2-227ENST00000557307 DIRAS2Q96HU8 199 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 PDCD10Q9BUL8 212 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 RABAC1Q9UI14 185 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 HERC2O95714 4834 aa7.96□□□□□ -1.14
SYNE2-227ENST00000557307 DNAH17Q9UFH2 4485 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 NUPR2A6NF83 97 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 MPTX1A8MV57 137 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 ZNF688P0C7X2 276 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 AKAIN1P0CW23 69 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 P2RY1P47900 373 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 SPCS3P61009 180 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 RPL11P62913 178 aaKnown RBP7.95□□□□□ -1.14
SYNE2-227ENST00000557307 OR11H2Q8NH07 326 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 DCANP1Q8TF63 244 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 PHLDA1Q8WV24 401 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-227ENST00000557307 RARRES2Q99969 163 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 SLIRPQ9GZT3 109 aaKnown RBP7.95□□□□□ -1.14
SYNE2-227ENST00000557307 CCDC59Q9P031 241 aaKnown RBP7.95□□□□□ -1.14
SYNE2-227ENST00000557307 C14orf166Q9Y224 244 aaKnown RBP7.95□□□□□ -1.14
SYNE2-227ENST00000557307 U3KQE9 123 aa7.95□□□□□ -1.14
SYNE2-227ENST00000557307 DISC1C4P0D8 188 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 H3BMQ9 156 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 DNASE2O00115 360 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-227ENST00000557307 CORTO00230 105 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 CTDSPLO15194 276 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 RPL5P46777 297 aaKnown RBP7.94□□□□□ -1.14
SYNE2-227ENST00000557307 DEFB1P60022 68 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 MRPS10P82664 201 aaKnown RBP7.94□□□□□ -1.14
SYNE2-227ENST00000557307 SSBP1Q04837 148 aaKnown RBP7.94□□□□□ -1.14
SYNE2-227ENST00000557307 C2orf83Q53S99 150 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 TRPT1Q86TN4 253 aaKnown RBP7.94□□□□□ -1.14
SYNE2-227ENST00000557307 Q8NAQ8 132 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms