RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 CLN5O75503 358 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 B3GALNT1O75752 331 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 CD74P04233 296 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 UCP1P25874 307 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 RPL5P46777 297 aaKnown RBP11.64□□□□□ -0.55
TUBB3-213ENST00000557262 HOXA1P49639 335 aaPredicted RBP11.64□□□□□ -0.55
TUBB3-213ENST00000557262 PPP5CP53041 499 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 CTF1Q16619 201 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 MLANAQ16655 118 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 OR4D10Q8NGI6 311 aa11.64□□□□□ -0.55
TUBB3-213ENST00000557262 NAA50Q9GZZ1 169 aaKnown RBP11.64□□□□□ -0.55
TUBB3-213ENST00000557262 FNDC4Q9H6D8 234 aaPredicted RBP11.64□□□□□ -0.55
TUBB3-213ENST00000557262 GABARAPO95166 117 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 RAB3DO95716 219 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 CA1P00915 261 aaPredicted RBP11.63□□□□□ -0.55
TUBB3-213ENST00000557262 OPRK1P41145 380 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 TAS2R19P59542 299 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 TMEM187Q14656 261 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 SCGB2B2Q4G0G5 96 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 LEMD1Q68G75 181 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 OR13C8Q8NGS7 320 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 OR4X1Q8NH49 305 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 RNASE11Q8TAA1 199 aaKnown RBP11.63□□□□□ -0.55
TUBB3-213ENST00000557262 C11orf45Q8TAV5 145 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 MARCH1Q8TCQ1 289 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 TMEM230Q96A57 120 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 MFFQ9GZY8 342 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 C11orf68Q9H3H3 251 aaKnown RBP11.63□□□□□ -0.55
TUBB3-213ENST00000557262 MRPL36Q9P0J6 103 aaKnown RBP11.63□□□□□ -0.55
TUBB3-213ENST00000557262 RABAC1Q9UI14 185 aa11.63□□□□□ -0.55
TUBB3-213ENST00000557262 FRAS1Q86XX4 4008 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 TRAV30A0A087WSZ9 112 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 SCGB2A1O75556 95 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 CDS2O95674 445 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 IFNA4P05014 189 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 CRYBB3P26998 211 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 NANOS2P60321 138 aaKnown RBP11.62□□□□□ -0.55
TUBB3-213ENST00000557262 SPCS3P61009 180 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 BSXQ3C1V8 233 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 LGALS9CQ6DKI2 356 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 STEAP1BQ6NZ63 245 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 Q6ZRM9 215 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 FAM219AQ8IW50 185 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 FAM24BQ8N5W8 94 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 METTL26Q96S19 204 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 TMEM222Q9H0R3 208 aa11.62□□□□□ -0.55
TUBB3-213ENST00000557262 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.62□□□□□ -0.55
TUBB3-213ENST00000557262 GABARAPH6UMI1 98 aa11.61□□□□□ -0.55
TUBB3-213ENST00000557262 SSBP1Q04837 148 aaKnown RBP11.61□□□□□ -0.55
TUBB3-213ENST00000557262 RBMS2Q15434 407 aaKnown RBP11.61□□□□□ -0.55
TUBB3-213ENST00000557262 AARDQ4LEZ3 155 aa11.61□□□□□ -0.55
TUBB3-213ENST00000557262 GPR107Q5VW38 600 aa11.61□□□□□ -0.55
TUBB3-213ENST00000557262 STHQ8IWL8 128 aa11.61□□□□□ -0.55
TUBB3-213ENST00000557262 GLYATL2Q8WU03 294 aa11.61□□□□□ -0.55
TUBB3-213ENST00000557262 RTBDNQ9BSG5 229 aaPredicted RBP11.61□□□□□ -0.55
TUBB3-213ENST00000557262 FBXL17Q9UF56 701 aa11.61□□□□□ -0.55
TUBB3-213ENST00000557262 TEX13DA0A0J9YY54 714 aaPredicted RBP11.6□□□□□ -0.55
TUBB3-213ENST00000557262 K7EQG2 157 aa11.6□□□□□ -0.55
TUBB3-213ENST00000557262 HTR2BP41595 481 aa11.6□□□□□ -0.55
TUBB3-213ENST00000557262 RPP25LQ8N5L8 163 aaKnown RBP11.6□□□□□ -0.55
TUBB3-213ENST00000557262 STXBP6Q8NFX7 210 aa11.6□□□□□ -0.55
TUBB3-213ENST00000557262 GRAMD2BQ96HH9 432 aa11.6□□□□□ -0.55
TUBB3-213ENST00000557262 NARS2Q96I59 477 aaKnown RBP11.6□□□□□ -0.55
TUBB3-213ENST00000557262 MIXL1Q9H2W2 232 aa11.6□□□□□ -0.55
TUBB3-213ENST00000557262 C14orf166Q9Y224 244 aaKnown RBP11.6□□□□□ -0.55
TUBB3-213ENST00000557262 RPS10-NUDT3A0A1W2PQS6 291 aa11.59□□□□□ -0.55
TUBB3-213ENST00000557262 DEFB4AO15263 64 aa11.59□□□□□ -0.55
TUBB3-213ENST00000557262 IGKV1-17P01599 117 aa11.59□□□□□ -0.55
TUBB3-213ENST00000557262 OR5AC1P0C628 307 aa11.59□□□□□ -0.55
TUBB3-213ENST00000557262 P2RY1P47900 373 aa11.59□□□□□ -0.55
TUBB3-213ENST00000557262 MRPS10P82664 201 aaKnown RBP11.59□□□□□ -0.55
TUBB3-213ENST00000557262 DHODHQ02127 395 aa11.59□□□□□ -0.55
TUBB3-213ENST00000557262 MEF2DQ14814 521 aa11.59□□□□□ -0.55
TUBB3-213ENST00000557262 SURF2Q15527 256 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-213ENST00000557262 TIGITQ495A1 244 aa11.59□□□□□ -0.55
TUBB3-213ENST00000557262 SELENOHQ8IZQ5 122 aaKnown RBP11.59□□□□□ -0.55
TUBB3-213ENST00000557262 RBPMSQ93062 196 aaKnown RBP11.59□□□□□ -0.55
TUBB3-213ENST00000557262 HEYLQ9NQ87 328 aaPredicted RBP11.59□□□□□ -0.55
TUBB3-213ENST00000557262 DISC1C4P0D8 188 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 CTDSP2O14595 271 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 RGS5O15539 181 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 SMIM18P0DKX4 95 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 C2orf83Q53S99 150 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 TMEM41BQ5BJD5 291 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 MORN3Q6PF18 240 aaPredicted RBP11.58□□□□□ -0.56
TUBB3-213ENST00000557262 TRPT1Q86TN4 253 aaKnown RBP11.58□□□□□ -0.56
TUBB3-213ENST00000557262 LHFPL5Q8TAF8 219 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 Q8WTZ3 238 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 GPR146Q96CH1 333 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 NAA60Q9H7X0 242 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 GPR132Q9UNW8 380 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 U3KQE9 123 aa11.58□□□□□ -0.56
TUBB3-213ENST00000557262 DEDDO75618 318 aa11.57□□□□□ -0.56
TUBB3-213ENST00000557262 GIG44P09565 113 aaPredicted RBP11.57□□□□□ -0.56
TUBB3-213ENST00000557262 SLC25A4P12235 298 aa11.57□□□□□ -0.56
TUBB3-213ENST00000557262 EIF2B2P49770 351 aaKnown RBP11.57□□□□□ -0.56
TUBB3-213ENST00000557262 AP2S1P53680 142 aaPredicted RBP11.57□□□□□ -0.56
TUBB3-213ENST00000557262 TCTAP57738 103 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms