RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 CBY3A6NI87 242 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 SLC17A2O00624 439 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 TMEM50AO95807 157 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 FGF2P09038 288 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 HOXA1P49639 335 aaPredicted RBP8.52□□□□□ -1.05
PSEN1-220ENST00000557037 HSD17B12Q53GQ0 312 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 OR10R2Q8NGX6 335 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 OR51H1Q8NH63 302 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 TMEM230Q96A57 120 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 FAM3DQ96BQ1 224 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 TMEM80Q96HE8 168 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 TMEM56Q96MV1 263 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 LINC00052Q96N35 136 aa8.52□□□□□ -1.05
PSEN1-220ENST00000557037 AK6Q9Y3D8 172 aaKnown RBP8.52□□□□□ -1.05
PSEN1-220ENST00000557037 DBX1A6NMT0 343 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 EBAG9O00559 213 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 CD1AP06126 327 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 CTXN2P0C2S0 81 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 HIST1H1DP16402 221 aaKnown RBP8.51□□□□□ -1.05
PSEN1-220ENST00000557037 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-220ENST00000557037 RASSF2P50749 326 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 ERVK-16P61578 105 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 PSG9Q00887 426 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 C16orf54Q6UWD8 224 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 ZNF114Q8NC26 417 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 RXFP4Q8TDU9 374 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 SAV1Q9H4B6 383 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-220ENST00000557037 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
PSEN1-220ENST00000557037 IRGMA1A4Y4 181 aa8.5□□□□□ -1.05
PSEN1-220ENST00000557037 SNAPC5O75971 98 aa8.5□□□□□ -1.05
PSEN1-220ENST00000557037 GADD45AP24522 165 aa8.5□□□□□ -1.05
PSEN1-220ENST00000557037 AP2S1P53680 142 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-220ENST00000557037 DNAL1Q4LDG9 190 aa8.5□□□□□ -1.05
PSEN1-220ENST00000557037 TPRA1Q86W33 373 aa8.5□□□□□ -1.05
PSEN1-220ENST00000557037 PLEKHA2Q9HB19 425 aa8.5□□□□□ -1.05
PSEN1-220ENST00000557037 RAB22AQ9UL26 194 aa8.5□□□□□ -1.05
PSEN1-220ENST00000557037 U3KQE9 123 aa8.5□□□□□ -1.05
PSEN1-220ENST00000557037 LOC100130705A0A1B0GUX0 176 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 MARCH11A6NNE9 402 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 F6UB75 175 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 SIVA1O15304 175 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 KRASP01116 189 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 AZU1P20160 251 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 RORCP51449 518 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 CATR1Q13166 79 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 FOXI2Q6ZQN5 318 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 SEPSECSQ9HD40 501 aaKnown RBP8.49□□□□□ -1.05
PSEN1-220ENST00000557037 COMMD9Q9P000 198 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 MRPL36Q9P0J6 103 aaKnown RBP8.49□□□□□ -1.05
PSEN1-220ENST00000557037 TNXBP22105 4242 aa8.49□□□□□ -1.05
PSEN1-220ENST00000557037 PLAC8L1A1L4L8 177 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 PTHLHP12272 177 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 M6PRP20645 277 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 DTYMKP23919 212 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 G6PCP35575 357 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 KRTAP10-4P60372 401 aaPredicted RBP8.48□□□□□ -1.05
PSEN1-220ENST00000557037 TIGITQ495A1 244 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 HES5Q5TA89 166 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 FAM78BQ5VT40 261 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 AADACL3Q5VUY0 350 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 CNIH2Q6PI25 160 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 SLC5A7Q9GZV3 580 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 PRNDQ9UKY0 176 aa8.48□□□□□ -1.05
PSEN1-220ENST00000557037 EFCAB10A6NFE3 127 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 HNRNPCP07910 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
PSEN1-220ENST00000557037 UCHL1P09936 223 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 ZNF79Q15937 498 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 MS4A15Q8N5U1 240 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 BPIFB6Q8NFQ5 453 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 OR13F1Q8NGS4 319 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 SLC7A6OSQ96CW6 309 aaPredicted RBP8.47□□□□□ -1.05
PSEN1-220ENST00000557037 IGF2BP2-AS1Q96M15 143 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 CLUHP3Q96NS8 147 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 SCPEP1Q9HB40 452 aa8.47□□□□□ -1.05
PSEN1-220ENST00000557037 ZNF701M0R085 212 aaPredicted RBP8.46□□□□□ -1.06
PSEN1-220ENST00000557037 FCGR2CP31995 323 aa8.46□□□□□ -1.06
PSEN1-220ENST00000557037 LPAR6P43657 344 aa8.46□□□□□ -1.06
PSEN1-220ENST00000557037 WNT4P56705 351 aa8.46□□□□□ -1.06
PSEN1-220ENST00000557037 GNGT1P63211 74 aa8.46□□□□□ -1.06
PSEN1-220ENST00000557037 SIGLEC15Q6ZMC9 328 aa8.46□□□□□ -1.06
PSEN1-220ENST00000557037 ZBTB34Q8NCN2 500 aa8.46□□□□□ -1.06
PSEN1-220ENST00000557037 LGALS14Q8TCE9 139 aa8.46□□□□□ -1.06
PSEN1-220ENST00000557037 WDR12Q9GZL7 423 aaKnown RBP8.46□□□□□ -1.06
PSEN1-220ENST00000557037 MYL12BO14950 172 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 CLN5O75503 358 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 NXPH4O95158 308 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 IGKV1-17P01599 117 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 HOXA5P20719 270 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 FXYD4P59646 89 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 MSMO1Q15800 293 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 MLANAQ16655 118 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 SPINK9Q5DT21 86 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 CADM3Q8N126 398 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 COQ8AQ8NI60 647 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 NUDCD2Q8WVJ2 157 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 ABHD1Q96SE0 405 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 FKBP11Q9NYL4 201 aa8.45□□□□□ -1.06
PSEN1-220ENST00000557037 NPIPB6E9PJ23 425 aa8.44□□□□□ -1.06
PSEN1-220ENST00000557037 TSPOP30536 169 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms