RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 CORTO00230 105 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 RNASE2P10153 161 aaKnown RBP13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 SPP1P10451 314 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 MIFP14174 115 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 NPPCP23582 126 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 HLA-DMBP28068 263 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 RND3P61587 244 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 MORN3Q6PF18 240 aaPredicted RBP13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 Q6ZTC4 211 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 METTL26Q96S19 204 aa13.26□□□□□ -0.29
VIPAS39-209ENST00000556909 KNCNA6PVL3 124 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 M0QYG6 137 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 CLN5O75503 358 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 IFNA17P01571 189 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 APOA1P02647 267 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 ZNF688P0C7X2 276 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 CRYBB3P26998 211 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 P2RY1P47900 373 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 AKR1C2P52895 323 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 PPP5CP53041 499 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 TP53RKQ96S44 253 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 FNDC4Q9H6D8 234 aaPredicted RBP13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 COMMD3Q9UBI1 195 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 X6R8D5 127 aa13.25□□□□□ -0.29
VIPAS39-209ENST00000556909 TRAV10A0A0B4J240 114 aa13.24□□□□□ -0.29
VIPAS39-209ENST00000556909 PI3P19957 117 aa13.24□□□□□ -0.29
VIPAS39-209ENST00000556909 OPRK1P41145 380 aa13.24□□□□□ -0.29
VIPAS39-209ENST00000556909 HOXA1P49639 335 aaPredicted RBP13.24□□□□□ -0.29
VIPAS39-209ENST00000556909 SUB1P53999 127 aaKnown RBP eCLIP13.24□□□□□ -0.29
VIPAS39-209ENST00000556909 PIGPP57054 158 aa13.24□□□□□ -0.29
VIPAS39-209ENST00000556909 DCANP1Q8TF63 244 aa13.24□□□□□ -0.29
VIPAS39-209ENST00000556909 PDCD10Q9BUL8 212 aa13.24□□□□□ -0.29
VIPAS39-209ENST00000556909 IGHV4-4A0A075B6R2 117 aa13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 ELOA3CA0A087WX78 387 aaPredicted RBP13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 SMIM31A0A1B0GVY4 71 aa13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 PGAM2P15259 253 aa13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 ETV6P41212 452 aa13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 LHFPL1Q86WI0 220 aa13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 OR4X1Q8NH49 305 aa13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 ZNF486Q96H40 463 aaPredicted RBP13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 CLEC5AQ9NY25 188 aa13.23□□□□□ -0.29
VIPAS39-209ENST00000556909 IGKV1-17P01599 117 aa13.22□□□□□ -0.29
VIPAS39-209ENST00000556909 ELK1P19419 428 aa13.22□□□□□ -0.29
VIPAS39-209ENST00000556909 MLANAQ16655 118 aa13.22□□□□□ -0.29
VIPAS39-209ENST00000556909 ACTL10Q5JWF8 245 aa13.22□□□□□ -0.29
VIPAS39-209ENST00000556909 CSNK1G2-AS1Q8NCQ2 148 aa13.22□□□□□ -0.29
VIPAS39-209ENST00000556909 TMEM230Q96A57 120 aa13.22□□□□□ -0.29
VIPAS39-209ENST00000556909 TBC1D24Q9ULP9 559 aa13.22□□□□□ -0.29
VIPAS39-209ENST00000556909 DYNC1H1Q14204 4646 aaKnown RBP13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 C3orf85A0A1B0GTC6 90 aa13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 SCGB2A1O75556 95 aa13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 ATG12O94817 140 aa13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 RPL5P46777 297 aaKnown RBP13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 BSXQ3C1V8 233 aa13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 TIGITQ495A1 244 aa13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 NARS2Q96I59 477 aaKnown RBP13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 RNF126Q9BV68 326 aa13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 ENY2Q9NPA8 101 aa13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 CELA1Q9UNI1 258 aa13.21□□□□□ -0.29
VIPAS39-209ENST00000556909 DNAH11Q96DT5 4516 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 A0A0G2JRQ6 117 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 HPGDSO60760 199 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 AMBPP02760 352 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 NCS1P62166 190 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 TRIM16LQ309B1 348 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 RNASE12Q5GAN4 147 aaKnown RBP13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 RNASE10Q5GAN6 216 aaKnown RBP13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 LINC00336Q6ZUF6 198 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 CENPSQ8N2Z9 138 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 U3KQE9 123 aa13.2□□□□□ -0.3
VIPAS39-209ENST00000556909 PKD1P98161 4303 aa13.19□□□□□ -0.3
VIPAS39-209ENST00000556909 DHRS2Q13268 280 aa13.19□□□□□ -0.3
VIPAS39-209ENST00000556909 SP6Q3SY56 376 aa13.19□□□□□ -0.3
VIPAS39-209ENST00000556909 PSMG4Q5JS54 123 aa13.19□□□□□ -0.3
VIPAS39-209ENST00000556909 ARRDC1Q8N5I2 433 aa13.19□□□□□ -0.3
VIPAS39-209ENST00000556909 GLMPQ8WWB7 406 aa13.19□□□□□ -0.3
VIPAS39-209ENST00000556909 VCX3AQ9NNX9 186 aa13.19□□□□□ -0.3
VIPAS39-209ENST00000556909 KLK11Q9UBX7 282 aa13.19□□□□□ -0.3
VIPAS39-209ENST00000556909 TRAV30A0A087WSZ9 112 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 A0A1B0GVY2 172 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 HELTA6NFD8 242 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 CD3DP04234 171 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 IGLC1P0CG04 106 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 UCP1P25874 307 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 EIF2B2P49770 351 aaKnown RBP13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 C12orf74Q32Q52 190 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 ZNF767PQ75MW2 155 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 RNASE11Q8TAA1 199 aaKnown RBP13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 RAB40CQ96S21 281 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 COPZ2Q9P299 210 aa13.18□□□□□ -0.3
VIPAS39-209ENST00000556909 DEFB131BA0A096LNP1 70 aa13.17□□□□□ -0.3
VIPAS39-209ENST00000556909 RPS10-NUDT3A0A1W2PQS6 291 aa13.17□□□□□ -0.3
VIPAS39-209ENST00000556909 VBP1P61758 197 aa13.17□□□□□ -0.3
VIPAS39-209ENST00000556909 AARDQ4LEZ3 155 aa13.17□□□□□ -0.3
VIPAS39-209ENST00000556909 C16orf54Q6UWD8 224 aa13.17□□□□□ -0.3
VIPAS39-209ENST00000556909 Q6ZRM9 215 aa13.17□□□□□ -0.3
VIPAS39-209ENST00000556909 CCDC71LQ8N9Z2 235 aa13.17□□□□□ -0.3
VIPAS39-209ENST00000556909 OR1S2Q8NGQ3 325 aa13.17□□□□□ -0.3
VIPAS39-209ENST00000556909 RYR1P21817 5038 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms