RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 OR13F1Q8NGS4 319 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 MRPL30Q8TCC3 161 aaKnown RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 PYDC1Q8WXC3 89 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 RBMXL1Q96E39 390 aaKnown RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 TMEM80Q96HE8 168 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 ABHD14BQ96IU4 210 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 SULT4A1Q9BR01 284 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 FAAP24Q9BTP7 215 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 TMEM59Q9BXS4 323 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 IFI27L2Q9H2X8 130 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 FGF20Q9NP95 211 aaPredicted RBP3.49□□□□□ -1.85
HIF1A-209ENST00000556827 SLC35D1Q9NTN3 355 aa3.49□□□□□ -1.85
HIF1A-209ENST00000556827 IGLV8-61A0A075B6I0 122 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 EFCAB10A6NFE3 127 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 FAM223BA6NKX1 122 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 M0R1X1 148 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 DYNC1I1O14576 645 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 MYL12BO14950 172 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 BRI3O95415 125 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 DHFRP00374 187 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 CELP19835 753 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 RHOGP84095 191 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 OR2G6Q5TZ20 316 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 XAF1Q6GPH4 301 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 UFSP1Q6NVU6 142 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 C6orf201Q7Z4U5 140 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 FAM223AQ8IWN6 122 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 SLC38A6Q8IZM9 456 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 DEFB125Q8N687 156 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 NECAP1Q8NC96 275 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 OR52B4Q8NGK2 314 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 PHYHIPLQ96FC7 376 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 ADTRPQ96IZ2 230 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 SPIN2AQ99865 258 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 SPIN2BQ9BPZ2 258 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 DCUN1D5Q9BTE7 237 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 RETNQ9HD89 108 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 C12orf4Q9NQ89 552 aa3.48□□□□□ -1.85
HIF1A-209ENST00000556827 LOC102724200A0A096LPH7 203 aaPredicted RBP3.47□□□□□ -1.85
HIF1A-209ENST00000556827 PNMA8CA0A1B0GUJ8 204 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 FBLL1A6NHQ2 334 aaKnown RBP3.47□□□□□ -1.85
HIF1A-209ENST00000556827 ZFP92A6NM28 416 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 TRDCB7Z8K6 153 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 BET1O15155 118 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 GGCTO75223 188 aaKnown RBP3.47□□□□□ -1.85
HIF1A-209ENST00000556827 IGKV1-16P04430 117 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 SRMP19623 302 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 HTR2CP28335 458 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 KIR2DS2P43631 304 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 APOC4P55056 127 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 HLA-DRB3P79483 266 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 ST3GAL4Q11206 333 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 EXOSC2Q13868 293 aaKnown RBP3.47□□□□□ -1.85
HIF1A-209ENST00000556827 TNXAQ16473 311 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 DEFB114Q30KQ6 69 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 RBM48Q5RL73 367 aaKnown RBP3.47□□□□□ -1.85
HIF1A-209ENST00000556827 IL34Q6ZMJ4 242 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 MS4A15Q8N5U1 240 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 ZFP41Q8N8Y5 198 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 OR10J5Q8NHC4 309 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 CYGBQ8WWM9 190 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 ACOT12Q8WYK0 555 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 FCGR1BQ92637 280 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 PTX4Q96A99 478 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 DERL3Q96Q80 235 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 KIR2DL4Q99706 377 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 CMSS1Q9BQ75 279 aaKnown RBP3.47□□□□□ -1.85
HIF1A-209ENST00000556827 GINS4Q9BRT9 223 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 AGMATQ9BSE5 352 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 GGTLC1Q9BX51 225 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 PLGRKTQ9HBL7 147 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 RDH8Q9NYR8 311 aa3.47□□□□□ -1.85
HIF1A-209ENST00000556827 TENM2Q9NT68 2774 aa3.46□□□□□ -1.85
HIF1A-209ENST00000556827 TRBV6-6A0A0A6YYG2 114 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 IZUMO1RA6ND01 250 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 CYB5BO43169 146 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 NAPSAO96009 420 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 IFNA4P05014 189 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 CD7P09564 240 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 CD3GP09693 182 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 APELAP0DMC3 54 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 DEFA4P12838 97 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 CBLN1P23435 193 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 BMI1P35226 326 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 TALDO1P37837 337 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 WNT4P56705 351 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 UBE2KP61086 200 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 RPS11P62280 158 aaKnown RBP eCLIP3.46□□□□□ -1.86
HIF1A-209ENST00000556827 PJVKQ0ZLH3 352 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 PRSS8Q16651 343 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 ACSM3Q53FZ2 586 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 OR10K2Q6IF99 312 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 CEMP1Q6PRD7 247 aaPredicted RBP3.46□□□□□ -1.86
HIF1A-209ENST00000556827 LINC00322Q6ZN03 302 aaPredicted RBP3.46□□□□□ -1.86
HIF1A-209ENST00000556827 OR56B1Q8NGI3 324 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 OR4A4PQ8NGN8 299 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 VSTM2AQ8TAG5 236 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 SRSF12Q8WXF0 261 aaKnown RBP3.46□□□□□ -1.86
HIF1A-209ENST00000556827 MARC2Q969Z3 335 aa3.46□□□□□ -1.86
HIF1A-209ENST00000556827 EEF1AKMT3Q96AZ1 226 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms