RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 LDLRAD2Q5SZI1 272 aa11.29□□□□□ -0.6
TRAPPC6B-206ENST00000556765 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
TRAPPC6B-206ENST00000556765 TMEM144Q7Z5S9 345 aa11.29□□□□□ -0.6
TRAPPC6B-206ENST00000556765 Q8N6K4 173 aa11.29□□□□□ -0.6
TRAPPC6B-206ENST00000556765 IGHV1-69DA0A0B4J2H0 117 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 CENPVL3A0A0U1RRI6 287 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 A0A1B0GW64 132 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 HOXA3O43365 443 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 IGHV1-69P01742 117 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 TAGLN2P37802 199 aaKnown RBP11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 CD69Q07108 199 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 MRGPRG-AS1Q2M3A8 158 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 TOR2AQ5JU69 321 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 RUSC1-AS1Q66K80 236 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 PVRIGQ6DKI7 326 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 OR1P1Q8NH06 330 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 TMEM170AQ8WVE7 144 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 SLC35E1Q96K37 410 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 HRH4Q9H3N8 390 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 LSM4Q9Y4Z0 139 aaKnown RBP11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 SOX21Q9Y651 276 aaPredicted RBP11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 DNAH1Q9P2D7 4330 aa11.28□□□□□ -0.6
TRAPPC6B-206ENST00000556765 IGLC7A0M8Q6 106 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 OR13C7P0DN81 318 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 TMEM11P17152 192 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 M6PRP20645 277 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 AKR1C1Q04828 323 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 PMS2P11Q13670 270 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 SRSF12Q8WXF0 261 aaKnown RBP11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 MEGF9Q9H1U4 602 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 PLA2G2EQ9NZK7 142 aa11.27□□□□□ -0.61
TRAPPC6B-206ENST00000556765 MDFIC2A0A1B0GVS7 189 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 CGB1A6NKQ9 187 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 NDUFS6O75380 124 aaKnown RBP11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 PRB3Q04118 309 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 WT1-ASQ06250 92 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 PEA15Q15121 130 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 ZNF562Q6V9R5 426 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 RITA1Q96K30 269 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 WWC2-AS2Q96NR7 200 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 TPSG1Q9NRR2 321 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 PLXNB1O43157 2135 aa11.26□□□□□ -0.61
TRAPPC6B-206ENST00000556765 CTXND1A0A1B0GTU2 59 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 CNIH1O95406 144 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 IFNA1P01562 189 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 OPN1MWP04001 364 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 OPN1MW2P0DN77 364 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 OPN1MW3P0DN78 364 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 IGHV4-38-2P0DP08 117 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 MYOD1P15172 320 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 CNTFRP26992 372 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 PPT1P50897 306 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 FFAR4Q5NUL3 377 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 SLC16A13Q7RTY0 426 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 OR10W1Q8NGF6 305 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 TMEM68Q96MH6 324 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 P2RX4Q99571 388 aa11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 ACTR3CQ9C0K3 210 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 F11RQ9Y624 299 aaKnown RBP11.25□□□□□ -0.61
TRAPPC6B-206ENST00000556765 IGHV3OR16-10A0A075B7F0 116 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 A0A1W2PRD5 423 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 A0A1W2PRF3 423 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 A0A1W2PRM7 423 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 TEX22C9J3V5 150 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 HLA-DRB1P01911 266 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 FBP1P09467 338 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 PROK1P58294 105 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 SELENOTP62341 195 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 GGTLC1Q9BX51 225 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 RPRMQ9NS64 109 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 SLC39A9Q9NUM3 307 aa11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 AURKAIP1Q9NWT8 199 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC6B-206ENST00000556765 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 NPIPB5A8MRT5 1133 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 SEC14L6B5MCN3 397 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 MT-CO2P00403 227 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 CD5P06127 495 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 GNB1P62873 340 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 FXYD3Q14802 87 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 C10orf55Q5SWW7 151 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 C16orf82Q7Z2V1 217 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 DYNAPQ8N1N2 210 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 OR10G4Q8NGN3 311 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 OR10G9Q8NGN4 311 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 OR10G7Q8NGN6 311 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 RCC1LQ96I51 464 aaKnown RBP11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
TRAPPC6B-206ENST00000556765 RNF2Q99496 336 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms