RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 BRWD1-AS2P59051 145 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 TAS2R31P59538 309 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 AP3S2P59780 193 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 OR2B8PP59922 312 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 RHOGP84095 191 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 NDPQ00604 133 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 ZNF45Q02386 682 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 SSBP1Q04837 148 aaKnown RBP3.59□□□□□ -1.83
ATXN3-243ENST00000556671 TATDN3Q17R31 274 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 SPINK9Q5DT21 86 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 VAX1Q5SQQ9 334 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 GGNBP1Q5YKI7 109 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 TRIQKQ629K1 86 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 TMED4Q7Z7H5 227 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 SLC25A42Q86VD7 318 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 SGPP2Q8IWX5 399 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 CENPSQ8N2Z9 138 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 ARRDC1Q8N5I2 433 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 TCTEX1D1Q8N7M0 179 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 ADAD2Q8NCV1 583 aaKnown RBP3.59□□□□□ -1.83
ATXN3-243ENST00000556671 OR10W1Q8NGF6 305 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 OR4C16Q8NGL9 310 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 OR6Q1Q8NGQ2 317 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 OR13C8Q8NGS7 320 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 TMEM167AQ8TBQ9 72 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 SMIM4Q8WVI0 70 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 DCUN1D4Q92564 292 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 RRNAD1Q96FB5 475 aaKnown RBP3.59□□□□□ -1.83
ATXN3-243ENST00000556671 UBE2E2Q96LR5 201 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 SCGB3A2Q96PL1 93 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 PRRT1Q99946 306 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 PDCD10Q9BUL8 212 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 NXF2Q9GZY0 626 aaKnown RBP3.59□□□□□ -1.83
ATXN3-243ENST00000556671 HRH4Q9H3N8 390 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 RANGRFQ9HD47 186 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-243ENST00000556671 ENY2Q9NPA8 101 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 ZC4H2Q9NQZ6 224 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 SLC2A9Q9NRM0 540 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 ANAPC10Q9UM13 185 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 NBEAL1Q6ZS30 2694 aa3.59□□□□□ -1.83
ATXN3-243ENST00000556671 A0A087WW49 117 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 ANKRD20A5PA0PJZ0 165 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF320A2RRD8 509 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 E7EUB6 86 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 LINC01619G3V211 115 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 OVOL1O14753 267 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 CYB5BO43169 146 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 GSTZ1O43708 216 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-243ENST00000556671 SOX15O60248 233 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 SAP30O75446 220 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 CD74P04233 296 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 CTSDP07339 412 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-243ENST00000556671 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 OR8U8P0C7N1 319 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF735P0CB33 412 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 AREGP15514 252 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 TBPP20226 339 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 ETV6P41212 452 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF616Q08AN1 781 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-243ENST00000556671 MSMO1Q15800 293 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF674Q2M3X9 581 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 CLEC19AQ6UXS0 136 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 C19orf35Q6ZS72 473 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 HAPLN4Q86UW8 402 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 PUSL1Q8N0Z8 303 aaKnown RBP3.58□□□□□ -1.84
ATXN3-243ENST00000556671 TTC9CQ8N5M4 171 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 UBAC2Q8NBM4 344 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 OR4A5Q8NH83 315 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 C4orf3Q8WVX3 66 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 MRGPRFQ96AM1 343 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-243ENST00000556671 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 OR4C12Q96R67 309 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 P2RX4Q99571 388 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 NEURL2Q9BR09 285 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-243ENST00000556671 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
ATXN3-243ENST00000556671 SLA2Q9H6Q3 261 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 FKBP11Q9NYL4 201 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 BET1LQ9NYM9 111 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 PEF1Q9UBV8 284 aaKnown RBP3.58□□□□□ -1.84
ATXN3-243ENST00000556671 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
ATXN3-243ENST00000556671 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 CEBPZOSA8MTT3 80 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 PPP5D1E7EU14 171 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 I3L521 148 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 RBFOX2O43251 390 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 PTTG1O95997 202 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 IGHV3-48P01763 117 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 HLA-AP01891 365 aaKnown RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 LGALS1P09382 135 aaKnown RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 ANXA3P12429 323 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 HIST1H1BP16401 226 aaKnown RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 S100A1P23297 94 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.844e-18■■■■■ 40.6
ATXN3-243ENST00000556671 PSMB6P28072 239 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms