RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 DHRS11Q6UWP2 260 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 CMTM1Q8IZ96 169 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 POM121L12Q8N7R1 296 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 ZNF114Q8NC26 417 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 DUSP18Q8NEJ0 188 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 PINX1Q96BK5 328 aaKnown RBP7.73□□□□□ -1.17
SYNE2-221ENST00000556342 CNBD2Q96M20 576 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 RABAC1Q9UI14 185 aa7.73□□□□□ -1.17
SYNE2-221ENST00000556342 DEFB131BA0A096LNP1 70 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 CLEC2LP0C7M8 214 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 P0DMU3 169 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 FAM231AP0DMU4 169 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 FAM231CP0DMU5 169 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 PSMB9P28065 219 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 SDC2P34741 201 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 NPBWR1P48145 328 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 RFX2P48378 723 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 MXD1Q05195 221 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 ZNF600Q6ZNG1 722 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 ZNF2Q9BSG1 426 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-221ENST00000556342 FXYD6Q9H0Q3 95 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 TMEM231Q9H6L2 316 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 IFT46Q9NQC8 304 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 DIABLOQ9NR28 239 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 CELA1Q9UNI1 258 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 SSR3Q9UNL2 185 aa7.72□□□□□ -1.17
SYNE2-221ENST00000556342 PUS1Q9Y606 427 aaKnown RBP eCLIP7.72□□□□□ -1.17
SYNE2-221ENST00000556342 PKD1P98161 4303 aa7.71□□□□□ -1.17
SYNE2-221ENST00000556342 KNCNA6PVL3 124 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 K7EQG2 157 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 M0R2N4 97 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 GPR31O00270 319 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 ZNF688P0C7X2 276 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 PRCDQ00LT1 54 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 IDNKQ5T6J7 187 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 CSNK1G2-AS1Q8NCQ2 148 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 STXBP6Q8NFX7 210 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 OR4A16Q8NH70 328 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 GRAMD2BQ96HH9 432 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 SEC22AQ96IW7 307 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 FAM212BQ9NTI7 297 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-221ENST00000556342 TBC1D24Q9ULP9 559 aa7.71□□□□□ -1.18
SYNE2-221ENST00000556342 A0A1B0GU03 582 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 A0A1W2PS18 150 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 ANKRD65E5RJM6 399 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 PMP2P02689 132 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 NPPCP23582 126 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 TAS2R46P59540 309 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 GABARAPL2P60520 117 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 HSPE1P61604 102 aaKnown RBP7.7□□□□□ -1.18
SYNE2-221ENST00000556342 ERHP84090 104 aaKnown RBP7.7□□□□□ -1.18
SYNE2-221ENST00000556342 C12orf74Q32Q52 190 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 LGALS9BQ3B8N2 356 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 ACTL10Q5JWF8 245 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 ZNF767PQ75MW2 155 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 H2BFWTQ7Z2G1 175 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 OR5H2Q8NGV7 314 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 DCANP1Q8TF63 244 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 NDUFAF3Q9BU61 184 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 SCRT1Q9BWW7 348 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 KRTAP4-5Q9BYR2 181 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 RNF167Q9H6Y7 350 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 CLEC5AQ9NY25 188 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 ANAPC10Q9UM13 185 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 AGRNO00468 2067 aa7.7□□□□□ -1.18
SYNE2-221ENST00000556342 TMEM50AO95807 157 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 IGKV1-39P01597 117 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 IGKV1D-39P04432 117 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 P2RY1P47900 373 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 HSPA13P48723 471 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 PHLDA2Q53GA4 152 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 IZUMO2Q6UXV1 221 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 SPARTQ8N0X7 666 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 OR6F1Q8NGZ6 308 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 FCGR1BQ92637 280 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 MRGPRFQ96AM1 343 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 METTL26Q96S19 204 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 HSPG2P98160 4391 aa7.69□□□□□ -1.18
SYNE2-221ENST00000556342 NAT1P18440 290 aa7.68□□□□□ -1.18
SYNE2-221ENST00000556342 CRYBB3P26998 211 aa7.68□□□□□ -1.18
SYNE2-221ENST00000556342 S100GP29377 79 aa7.68□□□□□ -1.18
SYNE2-221ENST00000556342 SPINK9Q5DT21 86 aa7.68□□□□□ -1.18
SYNE2-221ENST00000556342 TBC1D26Q86UD7 250 aa7.68□□□□□ -1.18
SYNE2-221ENST00000556342 VCX3BQ9H321 246 aa7.68□□□□□ -1.18
SYNE2-221ENST00000556342 LOC100506127A0A0U1RQW1 187 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 NPY1RP25929 384 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 HRH1P35367 487 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 SNCAP37840 140 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 PPP5CP53041 499 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 TAS2R20P59543 309 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 IZUMO4Q1ZYL8 232 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 KCTD21Q4G0X4 260 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 ZNF575Q86XF7 245 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 S100A16Q96FQ6 103 aaKnown RBP7.67□□□□□ -1.18
SYNE2-221ENST00000556342 NARS2Q96I59 477 aaKnown RBP7.67□□□□□ -1.18
SYNE2-221ENST00000556342 RAB40CQ96S21 281 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 CDIP1Q9H305 208 aa7.67□□□□□ -1.18
SYNE2-221ENST00000556342 MRPL36Q9P0J6 103 aaKnown RBP7.67□□□□□ -1.18
SYNE2-221ENST00000556342 IGLV2-18A0A075B6J9 118 aa7.66□□□□□ -1.18
SYNE2-221ENST00000556342 INS-IGF2F8WCM5 200 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms