RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 OR52R1Q8NGF1 315 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 OR5A1Q8NGJ0 315 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 BORCS7Q96B45 105 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 PRAP1Q96NZ9 151 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 SERPINI1Q99574 410 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 ULBP3Q9BZM4 244 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 TRABDQ9H4I3 376 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 UCK1Q9HA47 277 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 OR5AC2Q9NZP5 309 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 ERGIC3Q9Y282 383 aa0.67□□□□□ -2.3
SCFD1-218ENST00000556256 HEATR5AQ86XA9 2040 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 TRAV14DV4A0A0A6YYC5 116 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 C2orf70A6NJV1 201 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 FADS1O60427 444 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 ZNF682O95780 498 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 CRYZL1O95825 349 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 CDKN2CP42773 168 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 CCL7P80098 99 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 EDDM3AQ14507 147 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 RHEBQ15382 184 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 C12orf74Q32Q52 190 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 LINC01554Q52M75 96 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 TEX36Q5VZQ5 186 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 OR6V1Q8N148 313 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 HIST3H2BBQ8N257 126 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 OR4C6Q8NH72 309 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 SLC50A1Q9BRV3 221 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 RNF122Q9H9V4 155 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 SLC39A9Q9NUM3 307 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 V9GYY5 206 aaPredicted RBP0.66□□□□□ -2.3
SCFD1-218ENST00000556256 HECW1Q76N89 1606 aa0.66□□□□□ -2.3
SCFD1-218ENST00000556256 PCDH15Q96QU1 1955 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 LOC110117498A0A087WWA1 95 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 hADV38S2A0JD32 116 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 RBP1P09455 135 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 HIST1H3AP68431 136 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 H3F3AP84243 136 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 SRSF6Q13247 344 aaKnown RBP0.65□□□□□ -2.31
SCFD1-218ENST00000556256 KHDC3LQ587J8 217 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 SPANXN5Q5MJ07 72 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 DPPA3Q6W0C5 159 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 PHF13Q86YI8 300 aaPredicted RBP0.65□□□□□ -2.31
SCFD1-218ENST00000556256 LINC00311Q8N616 119 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 GDPD1Q8N9F7 314 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 OR4E2Q8NGC2 313 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 CT55Q8WUE5 264 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 DNAJC9Q8WXX5 260 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 ODF3Q96PU9 254 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 GINS4Q9BRT9 223 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 RNASE7Q9H1E1 156 aaKnown RBP0.65□□□□□ -2.31
SCFD1-218ENST00000556256 OR51V1Q9H2C8 321 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 C14orf105Q9NVL8 296 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 IDI2-AS1Q9NZ38 188 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 SLC22A13Q9Y226 551 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 PRELID3BQ9Y3B1 194 aa0.65□□□□□ -2.31
SCFD1-218ENST00000556256 PIK3C2GO75747 1445 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 NCOA1Q15788 1441 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 DIDO1Q9BTC0 2240 aaKnown RBP0.64□□□□□ -2.31
SCFD1-218ENST00000556256 PIRO00625 290 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 OR1I1O60431 355 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 BAALC-AS2P0C853 105 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 ERVS71-1P61550 626 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 CDK10Q15131 360 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 TMEM97Q5BJF2 176 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 FAM19A2Q8N3H0 131 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 LINC00471Q8N535 108 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 MNS1Q8NEH6 495 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 OR13D1Q8NGV5 346 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 C2orf50Q96LR7 162 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 TAS2R4Q9NYW5 299 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 CYSLTR1Q9Y271 337 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 SNURFQ9Y675 71 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 MYOFQ9NZM1 2061 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 CCDC144AA2RUR9 1427 aa0.64□□□□□ -2.31
SCFD1-218ENST00000556256 INTS1Q8N201 2190 aaKnown RBP0.63□□□□□ -2.31
SCFD1-218ENST00000556256 CACNA1BQ00975 2339 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 IGKV2D-26A0A0A0MRZ7 120 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 TRAV1-1A0A0B4J248 108 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 GEMIN2O14893 280 aaKnown RBP0.63□□□□□ -2.31
SCFD1-218ENST00000556256 LYZL6O75951 148 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 OR2B3O76000 313 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 UBL3O95164 117 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 SERPINE1P05121 402 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 CTXN2P0C2S0 81 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 BRS3P32247 399 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 SSR2P43308 183 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 RHOGP84095 191 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 LCA10Q71F78 164 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 OR52L1Q8NGH7 329 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 OR10J5Q8NHC4 309 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 ADAT3Q96EY9 351 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-218ENST00000556256 CMSS1Q9BQ75 279 aaKnown RBP0.63□□□□□ -2.31
SCFD1-218ENST00000556256 CCDC90BQ9GZT6 254 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 TLNRD1Q9H1K6 362 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 TMEM133Q9H2Q1 129 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 OSTCQ9NRP0 149 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 UQCC1Q9NVA1 299 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 UBAP1Q9NZ09 502 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 GLTPQ9NZD2 209 aa0.63□□□□□ -2.31
SCFD1-218ENST00000556256 HS3ST2Q9Y278 367 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms