RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 C11orf1Q9H5F2 150 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 TNFRSF19Q9NS68 423 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 CSPG4Q6UVK1 2322 aa12.18□□□□□ -0.46
NEK9-209ENST00000556170 PPIAL4CA0A0B4J2A2 164 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 PPIAL4GP0DN37 164 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 USF1P22415 310 aaPredicted RBP12.17□□□□□ -0.46
NEK9-209ENST00000556170 ZNF788Q6ZQV5 615 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 PNKDQ8N490 385 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 FBXL15Q9H469 300 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 TNRC6AQ8NDV7 1962 aaKnown RBP12.17□□□□□ -0.46
NEK9-209ENST00000556170 TEX50A0A1B0GTY4 177 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 ZNF253O75346 499 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 IGHV2-5P01817 119 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 BTF3P20290 206 aaKnown RBP12.17□□□□□ -0.46
NEK9-209ENST00000556170 PRR31Q5SQ13 230 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 TMEM183AQ8IXX5 376 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 BET1LQ9NYM9 111 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 IGHV3-35A0A0C4DH35 117 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 HSBP1L1C9JCN9 74 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 DLL1O00548 723 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 JOSD1Q15040 202 aaPredicted RBP12.17□□□□□ -0.46
NEK9-209ENST00000556170 C17orf58Q2M2W7 97 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 RAB1CQ92928 201 aa12.17□□□□□ -0.46
NEK9-209ENST00000556170 OR8B3Q8NGG8 313 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 OR1L4Q8NGR5 311 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 OR8B2Q96RD0 313 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 GNB4Q9HAV0 340 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 KIAA1549Q9HCM3 1950 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 TM4SF5O14894 197 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 PYYP10082 97 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 HINT1P49773 126 aaPredicted RBP12.16□□□□□ -0.46
NEK9-209ENST00000556170 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 OSR1Q8TAX0 266 aaPredicted RBP12.16□□□□□ -0.46
NEK9-209ENST00000556170 RAB1BQ9H0U4 201 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 ELOVL5Q9NYP7 299 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 AMTP48728 403 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 LOXL3P58215 753 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 RNASE7Q9H1E1 156 aaKnown RBP12.16□□□□□ -0.46
NEK9-209ENST00000556170 PRDM13Q9H4Q3 707 aa12.16□□□□□ -0.46
NEK9-209ENST00000556170 PGPA6NDG6 321 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 F2RL2O00254 374 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 PROP1O75360 226 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
NEK9-209ENST00000556170 MFAP2P55001 183 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 BRWD1-AS2P59051 145 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 IGFL2Q6UWQ7 119 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.15□□□□□ -0.46
NEK9-209ENST00000556170 FAM222BQ8WU58 562 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 TMEM186Q96B77 213 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 RAXQ9Y2V3 346 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 TMEM144Q7Z5S9 345 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 LINC01551Q86U37 167 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 MMD2Q8IY49 270 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 KIR3DL3Q8N743 410 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 KLHDC1Q8N7A1 406 aa12.15□□□□□ -0.46
NEK9-209ENST00000556170 MC5RP33032 325 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 ZNF738Q8NE65 137 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 OR5R1Q8NH85 324 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 SNHG12Q9BXW3 62 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 ZNF430Q9H8G1 570 aaPredicted RBP12.14□□□□□ -0.47
NEK9-209ENST00000556170 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
NEK9-209ENST00000556170 STAG3L2P0CL84 134 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 STAG3L3P0CL85 134 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 SRP14P37108 136 aaKnown RBP12.14□□□□□ -0.47
NEK9-209ENST00000556170 Q56UQ5 140 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 IBA57Q5T440 356 aaKnown RBP12.14□□□□□ -0.47
NEK9-209ENST00000556170 ZCCHC14Q8WYQ9 949 aaKnown RBP12.14□□□□□ -0.47
NEK9-209ENST00000556170 AMMECR1Q9Y4X0 333 aaPredicted RBP12.14□□□□□ -0.47
NEK9-209ENST00000556170 NAV3Q8IVL0 2385 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 A8MWP6 167 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 HSBP1O75506 76 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 CA1P00915 261 aaPredicted RBP12.14□□□□□ -0.47
NEK9-209ENST00000556170 SCRT1Q9BWW7 348 aa12.14□□□□□ -0.47
NEK9-209ENST00000556170 TMEM178BH3BS89 294 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 VENTXO95231 258 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 PRCDQ00LT1 54 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 S100A7AQ86SG5 101 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 OR2D3Q8NGH3 330 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 YTHDF2Q9Y5A9 579 aaKnown RBP12.13□□□□□ -0.47
NEK9-209ENST00000556170 LINC00305Q7Z4B0 112 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 RASL11BQ9BPW5 248 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 MRPL18Q9H0U6 180 aaKnown RBP12.13□□□□□ -0.47
NEK9-209ENST00000556170 CD33P20138 364 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 ZNF137PP52743 207 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 TCF15Q12870 199 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 TBR1Q16650 682 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 HLA-DRB5Q30154 266 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 ASPHD1Q5U4P2 390 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 GSX1Q9H4S2 264 aaPredicted RBP12.13□□□□□ -0.47
NEK9-209ENST00000556170 UBTD1Q9HAC8 227 aa12.13□□□□□ -0.47
NEK9-209ENST00000556170 TRBV24-1A0A075B6N3 115 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 IGHV3OR16-8A0A075B7F1 116 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 ERASQ7Z444 233 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 K7ERU9 68 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 HYPMO75409 117 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 COL8A2P25067 703 aa12.12□□□□□ -0.47
NEK9-209ENST00000556170 VDAC2P45880 294 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms