RNA–Protein interactions for RNA: ENST00000556098.1

CHGA-205, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-205ENST00000556098 RBMXL1Q96E39 390 aaKnown RBP8.78□□□□□ -1
CHGA-205ENST00000556098 PBDC1Q9BVG4 233 aa8.78□□□□□ -1
CHGA-205ENST00000556098 NPVFQ9HCQ7 196 aa8.78□□□□□ -1
CHGA-205ENST00000556098 WDR83OSQ9Y284 106 aa8.78□□□□□ -1
CHGA-205ENST00000556098 A0A1B0GW64 132 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 I3L521 148 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 RRHO14718 337 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 NBR2O15453 112 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 SLC25A17O43808 307 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 NDUFS6O75380 124 aaKnown RBP8.77□□□□□ -1.01
CHGA-205ENST00000556098 TAGLN2P37802 199 aaKnown RBP8.77□□□□□ -1.01
CHGA-205ENST00000556098 RPL27AP46776 148 aaKnown RBP8.77□□□□□ -1.01
CHGA-205ENST00000556098 CD69Q07108 199 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 ARL16Q0P5N6 197 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 DIAPH2-AS1Q14236 149 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 PSG5Q15238 335 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 TMEM41BQ5BJD5 291 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 ETFRF1Q6IPR1 90 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 BTNL8Q6UX41 500 aa8.77□□□□□ -1.01
CHGA-205ENST00000556098 TMEM182Q6ZP80 229 aaPredicted RBP8.77□□□□□ -1.01
CHGA-205ENST00000556098 ZNF430Q9H8G1 570 aaPredicted RBP8.77□□□□□ -1.01
CHGA-205ENST00000556098 NOTCH3Q9UM47 2321 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 COL7A1Q02388 2944 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 CYB5BO43169 146 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 FAM106CPP0CH98 169 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 FGF7P21781 194 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 ZNF616Q08AN1 781 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 PMS2P11Q13670 270 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 TOR2AQ5JU69 321 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 OR4F17Q8NGA8 305 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 C17orf50Q8WW18 174 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 OR4F4Q96R69 305 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 NPCDR1Q9BY65 106 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 SH3BGRL3Q9H299 93 aa8.76□□□□□ -1.01
CHGA-205ENST00000556098 METTL1Q9UBP6 276 aaKnown RBP8.76□□□□□ -1.01
CHGA-205ENST00000556098 K7EIL1 84 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 CA2P00918 260 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 H2AFB1P0C5Y9 115 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 RNASE2P10153 161 aaKnown RBP8.75□□□□□ -1.01
CHGA-205ENST00000556098 PF4V1P10720 104 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 OPRK1P41145 380 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 MMDQ15546 238 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 ACOT6Q3I5F7 207 aaPredicted RBP8.75□□□□□ -1.01
CHGA-205ENST00000556098 PVRIGQ6DKI7 326 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 TEPPQ6URK8 271 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 TMEM144Q7Z5S9 345 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 FAM213BQ8TBF2 198 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 CITED2Q99967 270 aaPredicted RBP8.75□□□□□ -1.01
CHGA-205ENST00000556098 HINT2Q9BX68 163 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 NPFFR1Q9GZQ6 430 aa8.75□□□□□ -1.01
CHGA-205ENST00000556098 IGKV1D-33P01593 117 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 IGKV1-33P01594 117 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 PPT1P50897 306 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 RUNX1Q01196 453 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 PEA15Q15121 130 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 PLGLAQ15195 96 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 TNXAQ16473 311 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 SPINK9Q5DT21 86 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 Q8N6K4 173 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 OR1P1Q8NH06 330 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 PCNPQ8WW12 178 aaKnown RBP8.74□□□□□ -1.01
CHGA-205ENST00000556098 MBD3L1Q8WWY6 194 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 EAF1Q96JC9 268 aaPredicted RBP8.74□□□□□ -1.01
CHGA-205ENST00000556098 SLC35E1Q96K37 410 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 WWC2-AS2Q96NR7 200 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 HRH4Q9H3N8 390 aa8.74□□□□□ -1.01
CHGA-205ENST00000556098 LSM4Q9Y4Z0 139 aaKnown RBP8.74□□□□□ -1.01
CHGA-205ENST00000556098 IGHV3-72A0A0B4J1Y9 119 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 CTXND1A0A1B0GTU2 59 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 WI2-2373I1.2A0A1W2PRP0 233 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 IFNA1P01562 189 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 PF4P02776 101 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 M6PRP20645 277 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 RPL29P47914 159 aaKnown RBP8.73□□□□□ -1.01
CHGA-205ENST00000556098 AKR1C1Q04828 323 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 SSX2Q16385 188 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 C5orf64Q2M2E5 130 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 KHDC1LQ5JSQ8 128 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 NDUFA11Q86Y39 141 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 CCDC28AQ8IWP9 274 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 TMEM68Q96MH6 324 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 RSG1Q9BU20 258 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 HILPDAQ9Y5L2 63 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 DNAH3Q8TD57 4116 aa8.73□□□□□ -1.01
CHGA-205ENST00000556098 IGLC7A0M8Q6 106 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 SMCO3A2RU48 225 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 SEC14L6B5MCN3 397 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 OR13C7P0DN81 318 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 TMEM11P17152 192 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 HOXD3P31249 432 aaPredicted RBP8.72□□□□□ -1.01
CHGA-205ENST00000556098 SELENOTP62341 195 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 HES1Q14469 280 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 MRGPRG-AS1Q2M3A8 158 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 LDLRAD2Q5SZI1 272 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 LHFPL4Q7Z7J7 247 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 TMEM219Q86XT9 240 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 TMEM170AQ8WVE7 144 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 SRSF12Q8WXF0 261 aaKnown RBP8.72□□□□□ -1.01
CHGA-205ENST00000556098 RNF2Q99496 336 aa8.72□□□□□ -1.01
CHGA-205ENST00000556098 P2RX4Q99571 388 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms