RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 CD24P25063 80 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 RND2P52198 227 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 MFAP2P55001 183 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 SSBP2P81877 361 aaPredicted RBP8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 EBI3Q14213 229 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 C5orf64Q2M2E5 130 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 RNF212Q495C1 297 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 PQLC2Q6ZP29 291 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 MIR17HGQ75NE6 70 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 FAM24BQ8N5W8 94 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 TMEM116Q8NCL8 245 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 OR1L6Q8NGR2 347 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 OR1L4Q8NGR5 311 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 HIST1H2BAQ96A08 127 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 BBC3Q96PG8 261 aaPredicted RBP8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 TBX15Q96SF7 602 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 MRPL32Q9BYC8 188 aaKnown RBP8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 TMEM167BQ9NRX6 74 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 NCBP2LA6PVI3 153 aaKnown RBP8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 IGHV3-48P01763 117 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 CRYBA1P05813 215 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 FAM106CPP0CH98 169 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 RNF224P0DH78 156 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 FOLR2P14207 255 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 ATP5G3P48201 142 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 ATP5J2P56134 94 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 BPIFB3P59826 476 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 FXYD3Q14802 87 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 CLEC2AQ6UVW9 174 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 DYNAPQ8N1N2 210 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 ZNF843Q8N446 348 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 C10orf105Q8TEF2 133 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 TMEM37Q8WXS4 190 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 WNT10AQ9GZT5 417 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 ARL2-SNX15V9GYD0 113 aa8.04□□□□□ -1.12
EFCAB11-209ENST00000556005 IGKV1D-37A0A075B6S9 117 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 COX7A2P2O60397 106 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 C8orf88P0DMB2 117 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 BRS3P32247 399 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 FLI1Q01543 452 aaPredicted RBP8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 ZNF90Q03938 601 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 ZNF562Q6V9R5 426 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 TRGV9Q99603 122 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 CTDSP1Q9GZU7 261 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 TNFRSF19Q9NS68 423 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 MRPL36Q9P0J6 103 aaKnown RBP8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 COL12A1Q99715 3063 aa8.03□□□□□ -1.12
EFCAB11-209ENST00000556005 ELOA3CA0A087WX78 387 aaPredicted RBP8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 PSMB11A5LHX3 300 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 CLDN34H7C241 214 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 OR7C2O60412 319 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 TMEM11P17152 192 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 CTRB1P17538 263 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 KIAA0141Q14154 515 aaPredicted RBP8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 ADIRFQ15847 76 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 C10orf113Q5VZT2 155 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 CTRB2Q6GPI1 263 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 Q8N6K4 173 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 OR51G1Q8NGK1 321 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 OR4X1Q8NH49 305 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 UHRF2Q96PU4 802 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 C1RLQ9NZP8 487 aa8.02□□□□□ -1.12
EFCAB11-209ENST00000556005 PLXNB1O43157 2135 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 DOPEY1Q5JWR5 2465 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 VWC2LB2RUY7 222 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 NDUFB4O95168 129 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 RAB5AP20339 215 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 NPPCP23582 126 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 SAA4P35542 130 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 RPL23P62829 140 aaKnown RBP8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 PAX8Q06710 450 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 C19orf35Q6ZS72 473 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 DOK5Q9P104 306 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 YTHDF2Q9Y5A9 579 aaKnown RBP8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 USP24Q9UPU5 2620 aa8.02□□□□□ -1.13
EFCAB11-209ENST00000556005 IGHV4-61A0A0C4DH41 118 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 I3L2K1 104 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 NPFFO15130 113 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 CX3CL1P78423 397 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 ELOBQ15370 118 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 ARPC1AQ92747 370 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 YPEL4Q96NS1 127 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 DMRT1Q9Y5R6 373 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 SPTAN1Q13813 2472 aaKnown RBP8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 NAV3Q8IVL0 2385 aa8.01□□□□□ -1.13
EFCAB11-209ENST00000556005 IGHV3-21A0A0B4J1V1 117 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 CENPVL3A0A0U1RRI6 287 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 C1orf196B1AJZ1 125 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 COX6B1P14854 86 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 DSCR9P59020 149 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 RAB5BP61020 215 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 RUSC1-AS1Q66K80 236 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 PATE2Q6UY27 113 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 ZNF503Q96F45 646 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 AJUBAQ96IF1 538 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 FAM103A1Q9BTL3 118 aaKnown RBP8□□□□□ -1.13
EFCAB11-209ENST00000556005 SLC25A2Q9BXI2 301 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 ASH1LQ9NR48 2969 aaKnown RBP8□□□□□ -1.13
EFCAB11-209ENST00000556005 AKAP6Q13023 2319 aa8□□□□□ -1.13
EFCAB11-209ENST00000556005 A0A1W2PRE2 83 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms