RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 TBC1D24Q9ULP9 559 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 HERC2O95714 4834 aa12.31□□□□□ -0.44
XRCC3-215ENST00000555964 IGHV4-4A0A075B6R2 117 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 TRAV30A0A087WSZ9 112 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 A0A1B0GU03 582 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 HELTA6NFD8 242 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 CLN5O75503 358 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 CRYBB3P26998 211 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 RND3P61587 244 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 SPINK9Q5DT21 86 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 Q6ZTC4 211 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 FAM24BQ8N5W8 94 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 OR4X1Q8NH49 305 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 C1QTNF4Q9BXJ3 329 aa12.3□□□□□ -0.44
XRCC3-215ENST00000555964 RPS10-NUDT3A0A1W2PQS6 291 aa12.29□□□□□ -0.44
XRCC3-215ENST00000555964 APOA1P02647 267 aa12.29□□□□□ -0.44
XRCC3-215ENST00000555964 AMBPP02760 352 aa12.29□□□□□ -0.44
XRCC3-215ENST00000555964 ZNF688P0C7X2 276 aa12.29□□□□□ -0.44
XRCC3-215ENST00000555964 RBMY1A1P0DJD3 496 aaKnown RBP12.29□□□□□ -0.44
XRCC3-215ENST00000555964 RBMY1CP0DJD4 496 aa12.29□□□□□ -0.44
XRCC3-215ENST00000555964 PGAM2P15259 253 aa12.29□□□□□ -0.44
XRCC3-215ENST00000555964 RPS19P39019 145 aaKnown RBP12.29□□□□□ -0.44
XRCC3-215ENST00000555964 RPL5P46777 297 aaKnown RBP12.29□□□□□ -0.44
XRCC3-215ENST00000555964 AP2S1P53680 142 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-215ENST00000555964 NUTF2P61970 127 aaKnown RBP12.29□□□□□ -0.44
XRCC3-215ENST00000555964 RBMY1FQ15415 496 aaKnown RBP12.29□□□□□ -0.44
XRCC3-215ENST00000555964 VPS13DQ5THJ4 4388 aa12.28□□□□□ -0.44
XRCC3-215ENST00000555964 ATP6V1G2O95670 118 aa12.28□□□□□ -0.44
XRCC3-215ENST00000555964 GIG44P09565 113 aaPredicted RBP12.28□□□□□ -0.44
XRCC3-215ENST00000555964 P0DMU3 169 aa12.28□□□□□ -0.44
XRCC3-215ENST00000555964 FAM231AP0DMU4 169 aa12.28□□□□□ -0.44
XRCC3-215ENST00000555964 FAM231CP0DMU5 169 aa12.28□□□□□ -0.44
XRCC3-215ENST00000555964 RNASE2P10153 161 aaKnown RBP12.28□□□□□ -0.44
XRCC3-215ENST00000555964 C4BPBP20851 252 aa12.28□□□□□ -0.44
XRCC3-215ENST00000555964 ACTL10Q5JWF8 245 aa12.28□□□□□ -0.44
XRCC3-215ENST00000555964 RNASE11Q8TAA1 199 aaKnown RBP12.28□□□□□ -0.44
XRCC3-215ENST00000555964 RRNAD1Q96FB5 475 aaKnown RBP12.28□□□□□ -0.44
XRCC3-215ENST00000555964 B3GALNT1O75752 331 aa12.27□□□□□ -0.45
XRCC3-215ENST00000555964 NPY1RP25929 384 aa12.27□□□□□ -0.45
XRCC3-215ENST00000555964 PIGPP57054 158 aa12.27□□□□□ -0.45
XRCC3-215ENST00000555964 SNRPD3P62318 126 aaKnown RBP12.27□□□□□ -0.45
XRCC3-215ENST00000555964 TRIM16LQ309B1 348 aa12.27□□□□□ -0.45
XRCC3-215ENST00000555964 SNX29P2Q8IUI4 249 aa12.27□□□□□ -0.45
XRCC3-215ENST00000555964 CCDC71LQ8N9Z2 235 aa12.27□□□□□ -0.45
XRCC3-215ENST00000555964 DCANP1Q8TF63 244 aa12.27□□□□□ -0.45
XRCC3-215ENST00000555964 X6R8D5 127 aa12.27□□□□□ -0.45
XRCC3-215ENST00000555964 MUC4Q99102 2169 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 DEFB131BA0A096LNP1 70 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 A0A0B4J293 547 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 KNCNA6PVL3 124 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 IGKV1-5P01602 117 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 P0C879 139 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 TGFBR1P36897 503 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 DHRS2Q13268 280 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 IZUMO4Q1ZYL8 232 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 RNASE10Q5GAN6 216 aaKnown RBP12.26□□□□□ -0.45
XRCC3-215ENST00000555964 ARRDC1Q8N5I2 433 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 OR1S2Q8NGQ3 325 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 NDUFAF3Q9BU61 184 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 SEPSECSQ9HD40 501 aaKnown RBP12.26□□□□□ -0.45
XRCC3-215ENST00000555964 COPZ2Q9P299 210 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 COMMD3Q9UBI1 195 aa12.26□□□□□ -0.45
XRCC3-215ENST00000555964 ELOA3CA0A087WX78 387 aaPredicted RBP12.25□□□□□ -0.45
XRCC3-215ENST00000555964 C3orf85A0A1B0GTC6 90 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 GSTZ1O43708 216 aaPredicted RBP12.25□□□□□ -0.45
XRCC3-215ENST00000555964 HNRNPCP07910 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
XRCC3-215ENST00000555964 TBPP20226 339 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 ETV6P41212 452 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 HTR2BP41595 481 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 PPP5CP53041 499 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 LSM3P62310 102 aaKnown RBP12.25□□□□□ -0.45
XRCC3-215ENST00000555964 PSMG4Q5JS54 123 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 POM121L12Q8N7R1 296 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 ZFAND1Q8TCF1 268 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 Q8WTZ3 238 aa12.25□□□□□ -0.45
XRCC3-215ENST00000555964 IGKV1-17P01599 117 aa12.24□□□□□ -0.45
XRCC3-215ENST00000555964 MED14OSP0DP75 135 aa12.24□□□□□ -0.45
XRCC3-215ENST00000555964 SLC25A4P12235 298 aa12.24□□□□□ -0.45
XRCC3-215ENST00000555964 SPCS3P61009 180 aa12.24□□□□□ -0.45
XRCC3-215ENST00000555964 FAM219AQ8IW50 185 aa12.24□□□□□ -0.45
XRCC3-215ENST00000555964 CSNK1G2-AS1Q8NCQ2 148 aa12.24□□□□□ -0.45
XRCC3-215ENST00000555964 TP53RKQ96S44 253 aa12.24□□□□□ -0.45
XRCC3-215ENST00000555964 FNDC4Q9H6D8 234 aaPredicted RBP12.24□□□□□ -0.45
XRCC3-215ENST00000555964 CLEC5AQ9NY25 188 aa12.24□□□□□ -0.45
XRCC3-215ENST00000555964 M0QYG6 137 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 BSXQ3C1V8 233 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 TIGITQ495A1 244 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 ETFRF1Q6IPR1 90 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 LHFPL1Q86WI0 220 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 OR52E5Q8NH55 327 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 YIPF6Q96EC8 236 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 RAB40CQ96S21 281 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 CACFD1Q9UGQ2 172 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 U3KQE9 123 aa12.23□□□□□ -0.45
XRCC3-215ENST00000555964 TMEM189A5PLL7 270 aa12.22□□□□□ -0.45
XRCC3-215ENST00000555964 PI3P19957 117 aa12.22□□□□□ -0.45
XRCC3-215ENST00000555964 UCP1P25874 307 aa12.22□□□□□ -0.45
XRCC3-215ENST00000555964 NUP62P37198 522 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-215ENST00000555964 YPEL3P61236 119 aaPredicted RBP12.22□□□□□ -0.45
XRCC3-215ENST00000555964 C12orf74Q32Q52 190 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms