RNA–Protein interactions for RNA: ENST00000555855.5

FOXN3-211, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-211ENST00000555855 UBE2NLQ5JXB2 153 aa14.04□□□□□ -0.16
FOXN3-211ENST00000555855 MRGPRFQ96AM1 343 aa14.04□□□□□ -0.16
FOXN3-211ENST00000555855 CORTO00230 105 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 IGKV1-39P01597 117 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 IGKV1D-39P04432 117 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 P2RY1P47900 373 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 EIF2B2P49770 351 aaKnown RBP14.03□□□□□ -0.16
FOXN3-211ENST00000555855 TAS2R20P59543 309 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 SPINK9Q5DT21 86 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 LYSMD2Q8IV50 215 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 SLC35G3Q8N808 338 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 NDUFAF3Q9BU61 184 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 CLEC5AQ9NY25 188 aa14.03□□□□□ -0.16
FOXN3-211ENST00000555855 M0R2N4 97 aa14.02□□□□□ -0.17
FOXN3-211ENST00000555855 IFNA17P01571 189 aa14.02□□□□□ -0.17
FOXN3-211ENST00000555855 C4BPBP20851 252 aa14.02□□□□□ -0.17
FOXN3-211ENST00000555855 CRYBB3P26998 211 aa14.02□□□□□ -0.17
FOXN3-211ENST00000555855 C12orf74Q32Q52 190 aa14.02□□□□□ -0.17
FOXN3-211ENST00000555855 KCTD21Q4G0X4 260 aa14.02□□□□□ -0.17
FOXN3-211ENST00000555855 PDCD10Q9BUL8 212 aa14.02□□□□□ -0.17
FOXN3-211ENST00000555855 DNAH17Q9UFH2 4485 aa14.02□□□□□ -0.17
FOXN3-211ENST00000555855 CLN5O75503 358 aa14.01□□□□□ -0.17
FOXN3-211ENST00000555855 AMBPP02760 352 aa14.01□□□□□ -0.17
FOXN3-211ENST00000555855 UCP3P55916 312 aa14.01□□□□□ -0.17
FOXN3-211ENST00000555855 NUTF2P61970 127 aaKnown RBP14.01□□□□□ -0.17
FOXN3-211ENST00000555855 SAMD12Q8N8I0 201 aa14.01□□□□□ -0.17
FOXN3-211ENST00000555855 CSNK1G2-AS1Q8NCQ2 148 aa14.01□□□□□ -0.17
FOXN3-211ENST00000555855 C1QTNF4Q9BXJ3 329 aa14.01□□□□□ -0.17
FOXN3-211ENST00000555855 HELTA6NFD8 242 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 INS-IGF2F8WCM5 200 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 ATG12O94817 140 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 PPP5CP53041 499 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 AP2S1P53680 142 aaPredicted RBP14□□□□□ -0.17
FOXN3-211ENST00000555855 DHRS2Q13268 280 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 ZNF767PQ75MW2 155 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 DCANP1Q8TF63 244 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 RAB40CQ96S21 281 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 Q9H521 79 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 ENY2Q9NPA8 101 aa14□□□□□ -0.17
FOXN3-211ENST00000555855 TRAV30A0A087WSZ9 112 aa13.99□□□□□ -0.17
FOXN3-211ENST00000555855 OPRK1P41145 380 aa13.99□□□□□ -0.17
FOXN3-211ENST00000555855 IZUMO4Q1ZYL8 232 aa13.99□□□□□ -0.17
FOXN3-211ENST00000555855 OR4X1Q8NH49 305 aa13.99□□□□□ -0.17
FOXN3-211ENST00000555855 CELA1Q9UNI1 258 aa13.99□□□□□ -0.17
FOXN3-211ENST00000555855 SMIM31A0A1B0GVY4 71 aa13.98□□□□□ -0.17
FOXN3-211ENST00000555855 RTL8CO15255 209 aa13.98□□□□□ -0.17
FOXN3-211ENST00000555855 IFNA10P01566 189 aa13.98□□□□□ -0.17
FOXN3-211ENST00000555855 IFNA21P01568 189 aa13.98□□□□□ -0.17
FOXN3-211ENST00000555855 RNASE2P10153 161 aaKnown RBP13.98□□□□□ -0.17
FOXN3-211ENST00000555855 HOXA1P49639 335 aaPredicted RBP13.98□□□□□ -0.17
FOXN3-211ENST00000555855 AKR1C2P52895 323 aa13.98□□□□□ -0.17
FOXN3-211ENST00000555855 LGALS9BQ3B8N2 356 aa13.98□□□□□ -0.17
FOXN3-211ENST00000555855 PSMG4Q5JS54 123 aa13.98□□□□□ -0.17
FOXN3-211ENST00000555855 FAT2Q9NYQ8 4349 aa13.97□□□□□ -0.17
FOXN3-211ENST00000555855 A0A0B4J293 547 aa13.97□□□□□ -0.17
FOXN3-211ENST00000555855 ETV6P41212 452 aa13.97□□□□□ -0.17
FOXN3-211ENST00000555855 RPL5P46777 297 aaKnown RBP13.97□□□□□ -0.17
FOXN3-211ENST00000555855 NEDD8Q15843 81 aa13.97□□□□□ -0.17
FOXN3-211ENST00000555855 MLANAQ16655 118 aa13.97□□□□□ -0.17
FOXN3-211ENST00000555855 GPX8Q8TED1 209 aa13.97□□□□□ -0.17
FOXN3-211ENST00000555855 Q8WTZ3 238 aa13.97□□□□□ -0.17
FOXN3-211ENST00000555855 PGAM2P15259 253 aa13.96□□□□□ -0.17
FOXN3-211ENST00000555855 RPS19P39019 145 aaKnown RBP13.96□□□□□ -0.17
FOXN3-211ENST00000555855 SNRPD3P62318 126 aaKnown RBP13.96□□□□□ -0.17
FOXN3-211ENST00000555855 TIGITQ495A1 244 aa13.96□□□□□ -0.17
FOXN3-211ENST00000555855 UBE2DNLQ8IWF7 75 aa13.96□□□□□ -0.17
FOXN3-211ENST00000555855 FNDC4Q9H6D8 234 aaPredicted RBP13.96□□□□□ -0.17
FOXN3-211ENST00000555855 SCPEP1Q9HB40 452 aa13.96□□□□□ -0.17
FOXN3-211ENST00000555855 MRPL36Q9P0J6 103 aaKnown RBP13.96□□□□□ -0.17
FOXN3-211ENST00000555855 XCL2Q9UBD3 114 aa13.96□□□□□ -0.17
FOXN3-211ENST00000555855 DNAH2Q9P225 4427 aa13.96□□□□□ -0.18
FOXN3-211ENST00000555855 RPS10-NUDT3A0A1W2PQS6 291 aa13.95□□□□□ -0.18
FOXN3-211ENST00000555855 IGKV1-5P01602 117 aa13.95□□□□□ -0.18
FOXN3-211ENST00000555855 HNRNPCP07910 306 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■□□□ 13.8
FOXN3-211ENST00000555855 U3KQE9 123 aa13.95□□□□□ -0.18
FOXN3-211ENST00000555855 SPART-AS1P0CW21 52 aa13.94□□□□□ -0.18
FOXN3-211ENST00000555855 RCVRNP35243 200 aa13.94□□□□□ -0.18
FOXN3-211ENST00000555855 RND3P61587 244 aa13.94□□□□□ -0.18
FOXN3-211ENST00000555855 SOHLH1Q5JUK2 328 aa13.94□□□□□ -0.18
FOXN3-211ENST00000555855 C16orf54Q6UWD8 224 aa13.94□□□□□ -0.18
FOXN3-211ENST00000555855 RRNAD1Q96FB5 475 aaKnown RBP13.94□□□□□ -0.18
FOXN3-211ENST00000555855 ZNF486Q96H40 463 aaPredicted RBP13.94□□□□□ -0.18
FOXN3-211ENST00000555855 SEPSECSQ9HD40 501 aaKnown RBP13.94□□□□□ -0.18
FOXN3-211ENST00000555855 DYNC1H1Q14204 4646 aaKnown RBP13.94□□□□□ -0.18
FOXN3-211ENST00000555855 IGKV1-17P01599 117 aa13.93□□□□□ -0.18
FOXN3-211ENST00000555855 SNX29P2Q8IUI4 249 aa13.93□□□□□ -0.18
FOXN3-211ENST00000555855 OR1S2Q8NGQ3 325 aa13.93□□□□□ -0.18
FOXN3-211ENST00000555855 RNASE11Q8TAA1 199 aaKnown RBP13.93□□□□□ -0.18
FOXN3-211ENST00000555855 FAM210BQ96KR6 192 aa13.93□□□□□ -0.18
FOXN3-211ENST00000555855 DNAH11Q96DT5 4516 aa13.93□□□□□ -0.18
FOXN3-211ENST00000555855 C3orf85A0A1B0GTC6 90 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 TMEM189A5PLL7 270 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 P0C879 139 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 TGFBR1P36897 503 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 PIGPP57054 158 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 TRIM16LQ309B1 348 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 GLMPQ8WWB7 406 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 TP53RKQ96S44 253 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 NEU1Q99519 415 aa13.92□□□□□ -0.18
FOXN3-211ENST00000555855 SCRT1Q9BWW7 348 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms