RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 SNHG12Q9BXW3 62 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 RNASE7Q9H1E1 156 aaKnown RBP13.11□□□□□ -0.31
TUBB3-209ENST00000555609 FREM2Q5SZK8 3169 aa13.11□□□□□ -0.31
TUBB3-209ENST00000555609 TCAPO15273 167 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 GATA2P23769 480 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-209ENST00000555609 MC5RP33032 325 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 C10orf113Q5VZT2 155 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 TGIF2LXQ8IUE1 241 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 NEU1Q99519 415 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 PAXXQ9BUH6 204 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 GNB4Q9HAV0 340 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 WASHC3Q9Y3C0 194 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 PPIAL4EA0A075B759 164 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 PPIAL4DF5H284 164 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 EREGO14944 169 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 PPIAL4FP0DN26 164 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 TMEM200BQ69YZ2 307 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 RPRMLQ8N4K4 120 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 OR10W1Q8NGF6 305 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 GRAMD2BQ96HH9 432 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 KCNS1Q96KK3 526 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 TMEM68Q96MH6 324 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 ZNF331Q9NQX6 463 aaPredicted RBP13.1□□□□□ -0.31
TUBB3-209ENST00000555609 PPIAL4AQ9Y536 164 aa13.1□□□□□ -0.31
TUBB3-209ENST00000555609 PRR14LQ5THK1 2151 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 C16orf97H3BN30 126 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 TNFRSF13BO14836 293 aaPredicted RBP13.09□□□□□ -0.31
TUBB3-209ENST00000555609 NDUFB3O43676 98 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 CHRNB4P30926 498 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 LGALS7P47929 136 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 FOXC1Q12948 553 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 VMA21Q3ZAQ7 101 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 LRRC10Q5BKY1 277 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 PVRIGQ6DKI7 326 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 OR4B1Q8NGF8 309 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 OR10X1Q8NGY0 326 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 TMEM190Q8WZ59 177 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 RND1Q92730 232 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 VAMP8Q9BV40 100 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 CBLN4Q9NTU7 201 aa13.09□□□□□ -0.31
TUBB3-209ENST00000555609 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
TUBB3-209ENST00000555609 AMMECR1Q9Y4X0 333 aaPredicted RBP13.09□□□□□ -0.31
TUBB3-209ENST00000555609 TMEM178BH3BS89 294 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 MGST1P10620 155 aaKnown RBP13.08□□□□□ -0.32
TUBB3-209ENST00000555609 SFTPCP11686 197 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 ADIPOQQ15848 244 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 MLANAQ16655 118 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 DMRTC2Q8IXT2 367 aaPredicted RBP13.08□□□□□ -0.32
TUBB3-209ENST00000555609 RBMXL3Q8N7X1 1067 aaKnown RBP13.08□□□□□ -0.32
TUBB3-209ENST00000555609 OR2T6Q8NHC8 308 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 ST6GALNAC6Q969X2 333 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 MBD6Q96DN6 1003 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 CHD8Q9HCK8 2581 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 APCSP02743 223 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 TDGF1P3P51864 188 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 C19orf35Q6ZS72 473 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 ZNF329Q86UD4 541 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 ZCCHC24Q8N2G6 241 aaKnown RBP13.08□□□□□ -0.32
TUBB3-209ENST00000555609 ZNF355PQ9NSJ1 428 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
TUBB3-209ENST00000555609 RAI1Q7Z5J4 1906 aaPredicted RBP13.07□□□□□ -0.32
TUBB3-209ENST00000555609 PEX7O00628 323 aa13.07□□□□□ -0.32
TUBB3-209ENST00000555609 IGLV2-23P01705 113 aa13.07□□□□□ -0.32
TUBB3-209ENST00000555609 CCL8P80075 99 aa13.07□□□□□ -0.32
TUBB3-209ENST00000555609 PAX2Q02962 417 aa13.07□□□□□ -0.32
TUBB3-209ENST00000555609 SERTAD4Q9NUC0 356 aa13.07□□□□□ -0.32
TUBB3-209ENST00000555609 KAAG1Q9UBP8 84 aa13.07□□□□□ -0.32
TUBB3-209ENST00000555609 ZNF253O75346 499 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 WT1-ASQ06250 92 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 FXYD3Q14802 87 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 TEX45Q8NA69 505 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 NPIPB3Q92617 1050 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 SNRNP40Q96DI7 357 aaKnown RBP13.06□□□□□ -0.32
TUBB3-209ENST00000555609 PERPQ96FX8 193 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 SAP30LQ9HAJ7 183 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 IGKV1D-37A0A075B6S9 117 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 TRAV5A0A0B4J249 113 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 A0A1W2PS18 150 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 CGB1A6NKQ9 187 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 BMPR1BO00238 502 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 CRYGCP07315 174 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 HIST1H1EP10412 219 aaKnown RBP13.06□□□□□ -0.32
TUBB3-209ENST00000555609 CCL3L1P16619 93 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 MYCNOSP40205 109 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 TBR1Q16650 682 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 ZNF705AQ6ZN79 300 aaPredicted RBP13.06□□□□□ -0.32
TUBB3-209ENST00000555609 C22orf34Q6ZV56 151 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 ATP5L2Q7Z4Y8 100 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 TNFRSF14Q92956 283 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 FXYD5Q96DB9 178 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 TRGV9Q99603 122 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 ZNRD1Q9P1U0 126 aa13.06□□□□□ -0.32
TUBB3-209ENST00000555609 DPRXA6NFQ7 191 aa13.05□□□□□ -0.32
TUBB3-209ENST00000555609 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
TUBB3-209ENST00000555609 FSTL3O95633 263 aa13.05□□□□□ -0.32
TUBB3-209ENST00000555609 FRMD6-AS1P0C7T7 363 aa13.05□□□□□ -0.32
TUBB3-209ENST00000555609 COMPP49747 757 aaPredicted RBP13.05□□□□□ -0.32
TUBB3-209ENST00000555609 PATE2Q6UY27 113 aa13.05□□□□□ -0.32
TUBB3-209ENST00000555609 VN1R17PQ8TDU5 208 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms