RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 K7EMT4 169 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 CORTO00230 105 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 ANXA3P12429 323 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 CCR6P51684 374 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 HAGHQ16775 308 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 TMEM128Q5BJH2 165 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 LGI3Q8N145 548 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 DUSP18Q8NEJ0 188 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 TMEM170AQ8WVE7 144 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 OR10C1Q96KK4 312 aa15.36■□□□□ 0.05
VTI1B-205ENST00000555543 SLC25A21Q9BQT8 299 aaPredicted RBP15.36■□□□□ 0.05
VTI1B-205ENST00000555543 HEYLQ9NQ87 328 aaPredicted RBP15.36■□□□□ 0.05
VTI1B-205ENST00000555543 TRAV25A0A0B4J276 109 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 CEBPZOSA8MTT3 80 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 OR11H12B2RN74 326 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 YIF1AO95070 293 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 OPRK1P41145 380 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 HTR2BP41595 481 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 NPBWR1P48145 328 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 SRPXP78539 464 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 ANKRD55Q3KP44 614 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 LINC00322Q6ZN03 302 aaPredicted RBP15.35■□□□□ 0.05
VTI1B-205ENST00000555543 RBPMS2Q6ZRY4 209 aaKnown RBP15.35■□□□□ 0.05
VTI1B-205ENST00000555543 SRD5A3Q9H8P0 318 aa15.35■□□□□ 0.05
VTI1B-205ENST00000555543 IGHV3-49A0A0A0MS15 119 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 VAMP1P23763 118 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 TNFRSF9Q07011 255 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 PPP1R1AQ13522 171 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 SMCO1Q147U7 214 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 C2orf83Q53S99 150 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 TRIQKQ629K1 86 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 SLC16A13Q7RTY0 426 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 OR52B4Q8NGK2 314 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 ZMAT4Q9H898 229 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 SMPXQ9UHP9 88 aa15.34■□□□□ 0.05
VTI1B-205ENST00000555543 IGHV7-4-1A0A0J9YVY3 117 aa15.33■□□□□ 0.04
VTI1B-205ENST00000555543 RBMY1BA6NDE4 496 aaKnown RBP15.33■□□□□ 0.04
VTI1B-205ENST00000555543 RBMY1EA6NEQ0 496 aaKnown RBP15.33■□□□□ 0.04
VTI1B-205ENST00000555543 TMEM50AO95807 157 aa15.33■□□□□ 0.04
VTI1B-205ENST00000555543 RBMY1DP0C7P1 496 aaKnown RBP15.33■□□□□ 0.04
VTI1B-205ENST00000555543 RBMS2Q15434 407 aaKnown RBP15.33■□□□□ 0.04
VTI1B-205ENST00000555543 TOMM20LQ6UXN7 152 aa15.33■□□□□ 0.04
VTI1B-205ENST00000555543 SLC24A4Q8NFF2 622 aa15.33■□□□□ 0.04
VTI1B-205ENST00000555543 ZFAND3Q9H8U3 227 aa15.33■□□□□ 0.04
VTI1B-205ENST00000555543 HSPB7Q9UBY9 170 aa15.33■□□□□ 0.04
VTI1B-205ENST00000555543 LINC00854A0A1B0GVQ3 168 aa15.32■□□□□ 0.04
VTI1B-205ENST00000555543 TSPAN4O14817 238 aa15.32■□□□□ 0.04
VTI1B-205ENST00000555543 INPP1P49441 399 aa15.32■□□□□ 0.04
VTI1B-205ENST00000555543 CENPSQ8N2Z9 138 aa15.32■□□□□ 0.04
VTI1B-205ENST00000555543 LRTM2Q8N967 370 aa15.32■□□□□ 0.04
VTI1B-205ENST00000555543 OR4X1Q8NH49 305 aa15.32■□□□□ 0.04
VTI1B-205ENST00000555543 RNF2Q99496 336 aa15.32■□□□□ 0.04
VTI1B-205ENST00000555543 SPAG8Q99932 426 aaPredicted RBP15.32■□□□□ 0.04
VTI1B-205ENST00000555543 PUS1Q9Y606 427 aaKnown RBP eCLIP15.32■□□□□ 0.04
VTI1B-205ENST00000555543 IGHV3OR16-13A0A075B7E8 117 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 IGHV3-74A0A0B4J1X5 117 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 A0A1B0GU03 582 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 DUXBA0A1W2PPF3 345 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 CHEK1O14757 476 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 CLN5O75503 358 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 SFT2D2O95562 160 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 IL7P13232 177 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 BTCP35070 178 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 ZNF600Q6ZNG1 722 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 TMEM116Q8NCL8 245 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 DTD1Q8TEA8 209 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 RHPN1-AS1Q9BWJ2 59 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 RBKSQ9H477 322 aa15.31■□□□□ 0.04
VTI1B-205ENST00000555543 NAP1L6A6NFF2 107 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 NDUFB6O95139 128 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 IGKV1-17P01599 117 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 NPY1RP25929 384 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 OR1S1Q8NH92 325 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 CITED4Q96RK1 184 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 SPATA25Q9BR10 227 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 RETNQ9HD89 108 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 CACFD1Q9UGQ2 172 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 FLVCR2Q9UPI3 526 aa15.3■□□□□ 0.04
VTI1B-205ENST00000555543 TRAV14DV4A0A0A6YYC5 116 aa15.29■□□□□ 0.04
VTI1B-205ENST00000555543 PITX3O75364 302 aa15.29■□□□□ 0.04
VTI1B-205ENST00000555543 APOHP02749 345 aaPredicted RBP15.29■□□□□ 0.04
VTI1B-205ENST00000555543 LAMTOR1Q6IAA8 161 aa15.29■□□□□ 0.04
VTI1B-205ENST00000555543 PRSS54Q6PEW0 395 aa15.29■□□□□ 0.04
VTI1B-205ENST00000555543 RNASEH2CQ8TDP1 164 aaKnown RBP15.29■□□□□ 0.04
VTI1B-205ENST00000555543 HIPK2Q9H2X6 1198 aa15.29■□□□□ 0.04
VTI1B-205ENST00000555543 RPS10-NUDT3A0A1W2PQS6 291 aa15.28■□□□□ 0.04
VTI1B-205ENST00000555543 RND2P52198 227 aa15.28■□□□□ 0.04
VTI1B-205ENST00000555543 ODF3L2Q3SX64 289 aa15.28■□□□□ 0.04
VTI1B-205ENST00000555543 TIGITQ495A1 244 aa15.28■□□□□ 0.04
VTI1B-205ENST00000555543 GINS3Q9BRX5 216 aa15.28■□□□□ 0.04
VTI1B-205ENST00000555543 UBQLN2Q9UHD9 624 aa15.28■□□□□ 0.04
VTI1B-205ENST00000555543 IFNA10P01566 189 aa15.27■□□□□ 0.04
VTI1B-205ENST00000555543 IGLC1P0CG04 106 aa15.27■□□□□ 0.04
VTI1B-205ENST00000555543 UBE2MP61081 183 aaKnown RBP15.27■□□□□ 0.04
VTI1B-205ENST00000555543 LILRB2Q8N423 598 aa15.27■□□□□ 0.04
VTI1B-205ENST00000555543 ST8SIA2Q92186 375 aa15.27■□□□□ 0.04
VTI1B-205ENST00000555543 CCDC32Q9BV29 185 aa15.27■□□□□ 0.04
VTI1B-205ENST00000555543 PIGBOS1A0A0B4J2F0 54 aa15.26■□□□□ 0.03
VTI1B-205ENST00000555543 IGHV3-66A0A0C4DH42 116 aa15.26■□□□□ 0.03
VTI1B-205ENST00000555543 HOXB5P09067 269 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms