RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 COL5A3P25940 1745 aaPredicted RBP1.74□□□□□ -2.13
KTN1-222ENST00000555506 SCAF11Q99590 1463 aaKnown RBP1.74□□□□□ -2.13
KTN1-222ENST00000555506 CPAMD8Q8IZJ3 1885 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 KIF1BO60333 1816 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 DPRXA6NFQ7 191 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 OR51F1A6NGY5 319 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 PPP5D1E7EU14 171 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 TRAPPC2LH3BP13 241 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 MFSD11O43934 449 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 C1QCP02747 245 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 RBP1P09455 135 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 RPS4Y1P22090 263 aaKnown RBP1.74□□□□□ -2.13
KTN1-222ENST00000555506 FXYD2P54710 66 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 AQP4P55087 323 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 ALX1Q15699 326 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 TMEM155Q4W5P6 130 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 KIAA2026Q5HYC2 2103 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 GRINAQ7Z429 371 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 PHF13Q86YI8 300 aaPredicted RBP1.74□□□□□ -2.13
KTN1-222ENST00000555506 OR13C6PQ8NH95 151 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 RASSF5Q8WWW0 418 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 TOMM6Q96B49 74 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 GPR146Q96CH1 333 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 HSPB9Q9BQS6 159 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 SS18L2Q9UHA2 77 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 CYSLTR1Q9Y271 337 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 SLC35A3Q9Y2D2 325 aa1.74□□□□□ -2.13
KTN1-222ENST00000555506 FBN1P35555 2871 aaKnown RBP1.74□□□□□ -2.13
KTN1-222ENST00000555506 GBF1Q92538 1859 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 KIF13BQ9NQT8 1826 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 MALRD1Q5VYJ5 2156 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 GREB1Q4ZG55 1949 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 TRAV9-1A0A075B6T8 112 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 TRAV4A0A0B4J268 109 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 MEIS3P1A6NDR6 274 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 NBEAP1P0C6P0 100 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 SPI1P17947 270 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 PPIBP23284 216 aaKnown RBP1.73□□□□□ -2.13
KTN1-222ENST00000555506 ERP29P30040 261 aaKnown RBP1.73□□□□□ -2.13
KTN1-222ENST00000555506 SERPINB1P30740 379 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 TCTAP57738 103 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 TSNQ15631 228 aaKnown RBP1.73□□□□□ -2.13
KTN1-222ENST00000555506 MOGQ16653 247 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 ZHX1-C8orf76Q96EF9 292 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 SH3BGRL3Q9H299 93 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 DISP1Q96F81 1524 aa1.73□□□□□ -2.13
KTN1-222ENST00000555506 MIA2Q96PC5 1412 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 GPR31O00270 319 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 HMGB3O15347 200 aaKnown RBP1.72□□□□□ -2.13
KTN1-222ENST00000555506 ZNF737O75373 536 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 IFNA10P01566 189 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 IFNA21P01568 189 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 TRGC1P0CF51 173 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 IDO1P14902 403 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 G6PCP35575 357 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 EIF2B2P49770 351 aaKnown RBP1.72□□□□□ -2.13
KTN1-222ENST00000555506 ZNF80P51504 273 aaPredicted RBP1.72□□□□□ -2.13
KTN1-222ENST00000555506 RHOBP62745 196 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 SUPT4H1P63272 117 aaKnown RBP1.72□□□□□ -2.13
KTN1-222ENST00000555506 KISS1Q15726 138 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 SPANXN3Q5MJ09 141 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 Q6Q795 121 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 Q6ZRN7 208 aaPredicted RBP1.72□□□□□ -2.13
KTN1-222ENST00000555506 H1FXQ92522 213 aaKnown RBP1.72□□□□□ -2.13
KTN1-222ENST00000555506 CCDC90BQ9GZT6 254 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 LYRM2Q9NU23 88 aaPredicted RBP1.72□□□□□ -2.13
KTN1-222ENST00000555506 NDUFAF1Q9Y375 327 aa1.72□□□□□ -2.13
KTN1-222ENST00000555506 TRBV19A0A075B6N1 114 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 OR2J2O76002 312 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 GPX1P07203 203 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 PHBP35232 272 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 DEFA3P59666 94 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 NCALDP61601 193 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 GNG5P63218 68 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 NDUFA5Q16718 116 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 AKR1C8PQ5T2L2 129 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 TMEM78Q5T7P6 136 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 STX19Q8N4C7 294 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 SLC25A40Q8TBP6 338 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 C11orf40Q8WZ69 217 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 RNF122Q9H9V4 155 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 C19orf12Q9NSK7 152 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 MED29Q9NX70 200 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 TVP23BQ9NYZ1 205 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 PTPRBP23467 1997 aa1.71□□□□□ -2.14
KTN1-222ENST00000555506 ZCCHC6Q5VYS8 1495 aaKnown RBP1.7□□□□□ -2.14
KTN1-222ENST00000555506 ORC5O43913 435 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 SMIM17P0DL12 118 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 ATP5G3P48201 142 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 COA5Q86WW8 74 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 EXOC3-AS1Q8N2X6 119 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 OR10K1Q8NGX5 313 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 PYDC1Q8WXC3 89 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 C2orf50Q96LR7 162 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 SCGB3A1Q96QR1 104 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 ACER3Q9NUN7 267 aa1.7□□□□□ -2.14
KTN1-222ENST00000555506 AMMECR1Q9Y4X0 333 aaPredicted RBP1.7□□□□□ -2.14
KTN1-222ENST00000555506 COL11A1P12107 1806 aaPredicted RBP1.7□□□□□ -2.14
KTN1-222ENST00000555506 MDC1Q14676 2089 aaKnown RBP1.69□□□□□ -2.14
KTN1-222ENST00000555506 MEIKINA0A087WXM9 373 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms