RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 GGACTQ9BVM4 153 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 NPFFR1Q9GZQ6 430 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 SAV1Q9H4B6 383 aaPredicted RBP7.84□□□□□ -1.15
PSEN1-213ENST00000555386 VAX2Q9UIW0 290 aa7.84□□□□□ -1.15
PSEN1-213ENST00000555386 PUS1Q9Y606 427 aaKnown RBP eCLIP7.84□□□□□ -1.15
PSEN1-213ENST00000555386 CTXND1A0A1B0GTU2 59 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 MAP1LC3B2A6NCE7 125 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 H0YJW9 148 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 MPDU1O75352 247 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 RBMXL2O75526 392 aaKnown RBP7.83□□□□□ -1.16
PSEN1-213ENST00000555386 NQO2P16083 231 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 RAB5AP20339 215 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 CD1BP29016 333 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 MMDQ15546 238 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 ZNF726P1Q15940 193 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 TMEM95Q3KNT9 176 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 ETV3LQ6ZN32 361 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 C1QL4Q86Z23 238 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 CYB561D1Q8N8Q1 229 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 ZNF709Q8N972 641 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 ZNF383Q8NA42 475 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 OR4S2Q8NH73 311 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 DDB2Q92466 427 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 MAP1LC3BQ9GZQ8 125 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 SLC39A9Q9NUM3 307 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 GNG13Q9P2W3 67 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 MOB4Q9Y3A3 225 aa7.83□□□□□ -1.16
PSEN1-213ENST00000555386 TMEM238LA0A1B0GVL6 79 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 FCGR3BO75015 233 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 OR2C1O95371 312 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 APOA2P02652 100 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 FGF7P21781 194 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 AKR1C3P42330 323 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 THBS3P49746 956 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 RPS16P62249 146 aaKnown RBP7.82□□□□□ -1.16
PSEN1-213ENST00000555386 FAM71F2Q6NXP2 309 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 C12orf54Q6X4T0 127 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 LINC00518Q8N0U6 118 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 OR4F5Q8NH21 305 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 OR4A16Q8NH70 328 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 YPEL4Q96NS1 127 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 C20orf24Q9BUV8 137 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 PRSS22Q9GZN4 317 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 VSIRQ9H7M9 311 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 MANBALQ9NQG1 85 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 SLC35D1Q9NTN3 355 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 TMEM242Q9NWH2 141 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 WASHC3Q9Y3C0 194 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 TNCP24821 2201 aa7.82□□□□□ -1.16
PSEN1-213ENST00000555386 TMEM89A2RUT3 159 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 C15orf62A8K5M9 175 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 IGKV1-16P04430 117 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 OR9G9P0C7N8 305 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 DLK1P80370 383 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 FOXL1Q12952 345 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 PLGLAQ15195 96 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 POU2AF1Q16633 256 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 FAM90A2PQ658T7 463 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 HIST2H2BDQ6DRA6 164 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 LCN15Q6UWW0 184 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 RPP25LQ8N5L8 163 aaKnown RBP7.81□□□□□ -1.16
PSEN1-213ENST00000555386 OR2T6Q8NHC8 308 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 RHOVQ96L33 236 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 RASL11BQ9BPW5 248 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 QTRT1Q9BXR0 403 aaKnown RBP7.81□□□□□ -1.16
PSEN1-213ENST00000555386 NPCDR1Q9BY65 106 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 ACTR3CQ9C0K3 210 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-213ENST00000555386 ZNF702PQ9H963 129 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 RNF114Q9Y508 228 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 ANK2Q01484 3957 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 ZFP92A6NM28 416 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 TMEM250H0YL14 139 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 CYB5BO43169 146 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 NDUFA7O95182 113 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 IFNA17P01571 189 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 AMY1AP04745 511 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 MC5RP33032 325 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 VDAC2P45880 294 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-213ENST00000555386 ELLP55199 621 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-213ENST00000555386 OR2B8PP59922 312 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 RAB11AP62491 216 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 RTL8BQ17RB0 113 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 ACOT6Q3I5F7 207 aaPredicted RBP7.81□□□□□ -1.16
PSEN1-213ENST00000555386 ACSM6Q6P461 480 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 C16orf82Q7Z2V1 217 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 FAM24BQ8N5W8 94 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 C3orf56Q8N813 242 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 C5orf56Q8N8D9 126 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 C11orf44Q8N8P7 122 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 OR5AN1Q8NGI8 311 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 OR10G9Q8NGN4 311 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 OR10G7Q8NGN6 311 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 LINC01006Q8NI28 216 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 FLYWCH2Q96CP2 140 aaKnown RBP7.81□□□□□ -1.16
PSEN1-213ENST00000555386 FBXL15Q9H469 300 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 KCNIP2Q9NS61 270 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 LINC00527Q9UJ94 153 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 WDR83OSQ9Y284 106 aa7.81□□□□□ -1.16
PSEN1-213ENST00000555386 CLPSL1A2RUU4 121 aa7.8□□□□□ -1.16
PSEN1-213ENST00000555386 C5orf52A6NGY3 159 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms