RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 FAM223AQ8IWN6 122 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 TMEM217Q8N7C4 229 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 UBAC2Q8NBM4 344 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 NECAP1Q8NC96 275 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 OR1L6Q8NGR2 347 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 MYOZ3Q8TDC0 251 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 USMG5Q96IX5 58 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 KLK15Q9H2R5 256 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 HIPK2Q9H2X6 1198 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 THYN1Q9P016 225 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 STRAPQ9Y3F4 350 aaKnown RBP8.49□□□□□ -1.05
SHMT2-218ENST00000555213 DMRT1Q9Y5R6 373 aa8.49□□□□□ -1.05
SHMT2-218ENST00000555213 PF4P02776 101 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 REG1AP05451 166 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 CRYGCP07315 174 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 CTRB1P17538 263 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 C4BPBP20851 252 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 ERHP84090 104 aaKnown RBP8.48□□□□□ -1.05
SHMT2-218ENST00000555213 RHOGP84095 191 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 EXOSC2Q13868 293 aaKnown RBP8.48□□□□□ -1.05
SHMT2-218ENST00000555213 VWC2Q2TAL6 325 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 C2orf83Q53S99 150 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 FAM209BQ5JX69 171 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 CTRB2Q6GPI1 263 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 BAP18Q8IXM2 172 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 P2RX4Q99571 388 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 GINS3Q9BRX5 216 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 ZNF471Q9BX82 626 aaPredicted RBP8.48□□□□□ -1.05
SHMT2-218ENST00000555213 ZC4H2Q9NQZ6 224 aa8.48□□□□□ -1.05
SHMT2-218ENST00000555213 ADARB2-AS1A8MUL3 147 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 JTBO76095 146 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 IFNA10P01566 189 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 LGALS1P09382 135 aaKnown RBP8.47□□□□□ -1.05
SHMT2-218ENST00000555213 SNCAP37840 140 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 SUB1P53999 127 aaKnown RBP eCLIP8.47□□□□□ -1.05
SHMT2-218ENST00000555213 ATP5IP56385 69 aaPredicted RBP8.47□□□□□ -1.05
SHMT2-218ENST00000555213 ATP5G2Q06055 141 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 CLINT1Q14677 625 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 PRR31Q5SQ13 230 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 HIST2H2BDQ6DRA6 164 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 C19orf35Q6ZS72 473 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 C8orf86Q6ZUL3 223 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 ZNF491Q8N8L2 437 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 OR1S2Q8NGQ3 325 aa8.47□□□□□ -1.05
SHMT2-218ENST00000555213 OR2J3O76001 311 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 TSPAN15O95858 294 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 IGHV3-11P01762 117 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 PRH1P02810 166 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 HTR2BP41595 481 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 SLC38A11Q08AI6 406 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 ATP6V1FQ16864 119 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 C15orf32Q32M92 178 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 OR8G2PQ6IF36 304 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 ALKAL2Q6UX46 152 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 ETV3LQ6ZN32 361 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 ZNF767PQ75MW2 155 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 STX12Q86Y82 276 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 ZNF114Q8NC26 417 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 SLC24A4Q8NFF2 622 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 OR1P1Q8NH06 330 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 EEF1AKMT3Q96AZ1 226 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 CXorf58Q96LI9 332 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 OR5B12Q96R08 314 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 ATP5SQ99766 215 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 GNB4Q9HAV0 340 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 FBXL7Q9UJT9 491 aa8.46□□□□□ -1.06
SHMT2-218ENST00000555213 F11RQ9Y624 299 aaKnown RBP8.46□□□□□ -1.06
SHMT2-218ENST00000555213 IGLV11-55A0A075B6I3 123 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 TRBV9A0A0B4J1U6 114 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 RPS10-NUDT3A0A1W2PQS6 291 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 CORTO00230 105 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 OR8U8P0C7N1 319 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 SPP1P10451 314 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 TPT1P13693 172 aaKnown RBP8.45□□□□□ -1.06
SHMT2-218ENST00000555213 NPY1RP25929 384 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 MYCNOSP40205 109 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 RPP30P78346 268 aaKnown RBP8.45□□□□□ -1.06
SHMT2-218ENST00000555213 RUNX1Q01196 453 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 KLK9Q2XQG4 91 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 SLC25A24Q6NUK1 477 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 OR10P1Q8NGE3 313 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 SCARB1Q8WTV0 552 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 DPF1Q92782 380 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 PARD6GQ9BYG4 376 aaPredicted RBP8.45□□□□□ -1.06
SHMT2-218ENST00000555213 FNDC4Q9H6D8 234 aaPredicted RBP8.45□□□□□ -1.06
SHMT2-218ENST00000555213 KLK9Q9UKQ9 250 aa8.45□□□□□ -1.06
SHMT2-218ENST00000555213 CCL24O00175 119 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 ATP6V0CP27449 155 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 DLK1P80370 383 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 DEFA5Q01523 94 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 ZNF616Q08AN1 781 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 KIAA0141Q14154 515 aaPredicted RBP8.44□□□□□ -1.06
SHMT2-218ENST00000555213 DEFB136Q30KP8 78 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 FAM74A1Q5RGS3 127 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 TREML4Q6UXN2 200 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 C18orf65Q6ZTR6 163 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 OR1N2Q8NGR9 330 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 PCNPQ8WW12 178 aaKnown RBP8.44□□□□□ -1.06
SHMT2-218ENST00000555213 TMED6Q8WW62 240 aa8.44□□□□□ -1.06
SHMT2-218ENST00000555213 PHYHIPLQ96FC7 376 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms