RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 MLANAQ16655 118 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 GCSAMLQ5JQS6 135 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 TMEM144Q7Z5S9 345 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 PIP4P2Q8N4L2 257 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 THAP8Q8NA92 274 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 RNASEH2CQ8TDP1 164 aaKnown RBP7.08□□□□□ -1.28
TDP1-210ENST00000554976 EAF1Q96JC9 268 aaPredicted RBP7.08□□□□□ -1.28
TDP1-210ENST00000554976 ENY2Q9NPA8 101 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 MRPL36Q9P0J6 103 aaKnown RBP7.08□□□□□ -1.28
TDP1-210ENST00000554976 CR1P17927 2039 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 TACC2O95359 2948 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 CSMD1Q96PZ7 3565 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 CENPVL3A0A0U1RRI6 287 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 CTXND1A0A1B0GTU2 59 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 MOSP00540 346 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 HBE1P02100 147 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 KIAA0141Q14154 515 aaPredicted RBP7.08□□□□□ -1.28
TDP1-210ENST00000554976 KLK9Q2XQG4 91 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 ASPHD1Q5U4P2 390 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 C22orf15Q8WYQ4 148 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 FBXL15Q9H469 300 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 KLK9Q9UKQ9 250 aa7.08□□□□□ -1.28
TDP1-210ENST00000554976 NBR2O15453 112 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 HSPB1P04792 205 aaKnown RBP7.07□□□□□ -1.28
TDP1-210ENST00000554976 SNRNP70P08621 437 aaKnown RBP7.07□□□□□ -1.28
TDP1-210ENST00000554976 DEFA4P12838 97 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 AREGP15514 252 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 SLC25A24Q6NUK1 477 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 TEPPQ6URK8 271 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 OR10G9Q8NGN4 311 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 OR10G7Q8NGN6 311 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 CACNG8Q8WXS5 425 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 HILPDAQ9Y5L2 63 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 PXMP4Q9Y6I8 212 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 MAP1LC3B2A6NCE7 125 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 HAGHQ16775 308 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 ZNF787Q6DD87 383 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 MAP1LC3BQ9GZQ8 125 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 RPS10P5Q9NQ39 176 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 COL12A1Q99715 3063 aa7.07□□□□□ -1.28
TDP1-210ENST00000554976 A6NJY4 79 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 EGR2P11161 476 aaPredicted RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 RPL27AP46776 148 aaKnown RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 FGF8P55075 233 aaPredicted RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 KHDC3LQ587J8 217 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 MIC13Q5XKP0 118 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 C19orf35Q6ZS72 473 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 MRPL52Q86TS9 123 aaKnown RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 SNHG12Q9BXW3 62 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 GSX1Q9H4S2 264 aaPredicted RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 DOK5Q9P104 306 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 TNCP24821 2201 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 BCL2P10415 239 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 CDKN1BP46527 198 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 ATP5J2P56134 94 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 KRTAP10-9P60411 292 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 ERHP84090 104 aaKnown RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 TNXAQ16473 311 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 FAM120AOSQ5T036 256 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 KRTAP1-3Q8IUG1 177 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 HIST3H2BBQ8N257 126 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 STPG3Q8N7X2 389 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 PBDC1Q9BVG4 233 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 SLC35B3Q9H1N7 401 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 F11RQ9Y624 299 aaKnown RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 NBASA2RRP1 2371 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 A0A1B0GV50 99 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 A0A1W2PPQ1 181 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 M0R143 59 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 COX6B1P14854 86 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 SAA4P35542 130 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 DSCR9P59020 149 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 ACOT6Q3I5F7 207 aaPredicted RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 FAM90A2PQ658T7 463 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 OR2T10Q8NGZ9 312 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 OR1P1Q8NH06 330 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 OR2T6Q8NHC8 308 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 SRSF12Q8WXF0 261 aaKnown RBP7.06□□□□□ -1.28
TDP1-210ENST00000554976 HINT2Q9BX68 163 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 SLC25A22Q9H936 323 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 SLC39A9Q9NUM3 307 aa7.06□□□□□ -1.28
TDP1-210ENST00000554976 ASH1LQ9NR48 2969 aaKnown RBP7.05□□□□□ -1.28
TDP1-210ENST00000554976 NPFFO15130 113 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 REG1AP05451 166 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 STAG3L2P0CL84 134 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 STAG3L3P0CL85 134 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 OR13C7P0DN81 318 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 NDPQ00604 133 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 C5orf64Q2M2E5 130 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 CCDC144NLQ6NUI1 221 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 LCN15Q6UWW0 184 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 PIFOQ8TCI5 191 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 SLC35E1Q96K37 410 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 A0A1W2PRD5 423 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 A0A1W2PRF3 423 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 A0A1W2PRM7 423 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 C7orf77A4D0Y5 90 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 I3L2K1 104 aa7.05□□□□□ -1.28
TDP1-210ENST00000554976 GGCTO75223 188 aaKnown RBP7.05□□□□□ -1.28
TDP1-210ENST00000554976 CD24P25063 80 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms