RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 AESQ08117 197 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 Q6AWC8 147 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 TCEAL6Q6IPX3 200 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 MEX3BQ6ZN04 569 aaKnown RBP2.71□□□□□ -1.98
SEC23A-207ENST00000554615 SPACA3Q8IXA5 215 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 SCGB1C1Q8TD33 95 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 GTSF1Q8WW33 167 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 WFIKKN1Q96NZ8 548 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 ZNF430Q9H8G1 570 aaPredicted RBP2.71□□□□□ -1.98
SEC23A-207ENST00000554615 ZFAND3Q9H8U3 227 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 NAGKQ9UJ70 344 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 OR51B2Q9Y5P1 312 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 A0A096LNT2 108 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 K7EIM0 57 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 K7EMI3 77 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 PAGE4O60829 102 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 OR5AL1P0C617 328 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 FAM87AP0C7U9 286 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 SAA1P0DJI8 122 aaPredicted RBP2.71□□□□□ -1.98
SEC23A-207ENST00000554615 LDLRAD2Q5SZI1 272 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 MORN5Q5VZ52 161 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 H2BFWTQ7Z2G1 175 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 Q86TA4 180 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 LRP11Q86VZ4 500 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 OR1L4Q8NGR5 311 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 LHX4Q969G2 390 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 TMEM18Q96B42 140 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 DNAJA3Q96EY1 480 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 CLUHP3Q96NS8 147 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 SMIM7Q9BQ49 75 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 SHANK2-AS3Q9BTD1 123 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 DERL1Q9BUN8 251 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 SMIM3Q9BZL3 60 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 MS4A6AQ9H2W1 248 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 OR2S2Q9NQN1 319 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 HIF1ANQ9NWT6 349 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 MRPL36Q9P0J6 103 aaKnown RBP2.71□□□□□ -1.98
SEC23A-207ENST00000554615 HIGD1BQ9P298 99 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 GNG13Q9P2W3 67 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 PRRC2BQ5JSZ5 2229 aaKnown RBP2.71□□□□□ -1.98
SEC23A-207ENST00000554615 SPTBP11277 2137 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 A0A0G2JNJ9 132 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 H3BSH0 61 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 NUPL2O15504 423 aaKnown RBP2.71□□□□□ -1.98
SEC23A-207ENST00000554615 ZNF324O75467 553 aaPredicted RBP2.71□□□□□ -1.98
SEC23A-207ENST00000554615 IGHV1-8P0DP01 117 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 APOBEC3AP31941 199 aaPredicted RBP2.71□□□□□ -1.98
SEC23A-207ENST00000554615 RPEL1Q2QD12 228 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 PRSS33Q8NF86 280 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 VSTM2AQ8TAG5 236 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 VN1R17PQ8TDU5 208 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 TMEM68Q96MH6 324 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 SIRPDQ9H106 197 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 Q9UFV3 132 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 LENEPQ9Y5L5 61 aa2.71□□□□□ -1.98
SEC23A-207ENST00000554615 MED13Q9UHV7 2174 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 LAMA3Q16787 3333 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 DPRXA6NFQ7 191 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 H3BUA1 57 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 EREGO14944 169 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 CRIP1P50238 77 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 ELLP55199 621 aaPredicted RBP2.7□□□□□ -1.98
SEC23A-207ENST00000554615 RPL19P84098 196 aaKnown RBP2.7□□□□□ -1.98
SEC23A-207ENST00000554615 SRSF1Q07955 248 aaKnown RBP eCLIP2.7□□□□□ -1.98
SEC23A-207ENST00000554615 ZNF616Q08AN1 781 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 FAM162BQ5T6X4 162 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 C2orf91Q6ZV80 131 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 ZFP82Q8N141 532 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 OR1N2Q8NGR9 330 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 ODF3Q96PU9 254 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 ATG101Q9BSB4 218 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 GAL3ST2Q9H3Q3 398 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 NIT2Q9NQR4 276 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 TRAPPC2LQ9UL33 140 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 PROCRQ9UNN8 238 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 A0A096LPE4 126 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 A0A1W2PPZ6 126 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 XKRY2A2RUG3 117 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 CLPSL1A2RUU4 121 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 FTH1P19P0C7X4 201 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 CCL2P13500 99 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 OTX2P32243 289 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 RPL39P5Q59GN2 51 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 LINC00322Q6ZN03 302 aaPredicted RBP2.7□□□□□ -1.98
SEC23A-207ENST00000554615 MIR17HGQ75NE6 70 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 TMEM217Q8N7C4 229 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 OR4C13Q8NGP0 309 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 PHLDA1Q8WV24 401 aaPredicted RBP2.7□□□□□ -1.98
SEC23A-207ENST00000554615 OR2V2Q96R30 315 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 ARRDC1-AS1Q9H2J1 176 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 GNB4Q9HAV0 340 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 ST20Q9HBF5 79 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 EPDR1Q9UM22 224 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 ZFP30Q9Y2G7 519 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 RANBP2P49792 3224 aaKnown RBP2.7□□□□□ -1.98
SEC23A-207ENST00000554615 MYO7AQ13402 2215 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 TMEM89A2RUT3 159 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 DEFB108AA8MXU0 73 aa2.7□□□□□ -1.98
SEC23A-207ENST00000554615 BUB1B-PAK6H3BSN5 160 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms