RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 F8W036 122 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 PRB2P02812 416 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-214ENST00000554604 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 ADCYAP1P18509 176 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 FHITP49789 147 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 HSPE1P61604 102 aaKnown RBP9.75□□□□□ -0.85
SHMT2-214ENST00000554604 GUK1Q16774 197 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 KPRPQ5T749 579 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-214ENST00000554604 OR8G2PQ6IF36 304 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 TEX38Q6PEX7 206 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 SPSB3Q6PJ21 355 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 REC114Q7Z4M0 266 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 VKORC1L1Q8N0U8 176 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 SVBPQ8N300 66 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 OR5AN1Q8NGI8 311 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 OSR1Q8TAX0 266 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-214ENST00000554604 PBDC1Q9BVG4 233 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 TMEM231Q9H6L2 316 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 BET1LQ9NYM9 111 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 PRNDQ9UKY0 176 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 ZNF257Q9Y2Q1 563 aa9.75□□□□□ -0.85
SHMT2-214ENST00000554604 TRAV3A0A0B4J244 114 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 UBE2L5PA0A1B0GUS4 154 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 UPK2O00526 184 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 AGPAT2O15120 278 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 IGLL1P15814 213 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 RAB2AP61019 212 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 DEFA5Q01523 94 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 PDPNQ86YL7 162 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 WFDC9Q8NEX5 89 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 SUN5Q8TC36 379 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 NABP2Q9BQ15 211 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 RSG1Q9BU20 258 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 GGACTQ9BVM4 153 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 KIAA1456Q9P272 454 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 FBXO7Q9Y3I1 522 aa9.74□□□□□ -0.85
SHMT2-214ENST00000554604 PRKDCP78527 4128 aaKnown RBP9.73□□□□□ -0.85
SHMT2-214ENST00000554604 H0YJW9 148 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 SOX15O60248 233 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 SFTA3P0C7M3 94 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 TMEM41BQ5BJD5 291 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 MBD3L1Q8WWY6 194 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 RCC1LQ96I51 464 aaKnown RBP9.73□□□□□ -0.85
SHMT2-214ENST00000554604 RITA1Q96K30 269 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 HSPB9Q9BQS6 159 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 NKX6-2Q9C056 277 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-214ENST00000554604 HEYLQ9NQ87 328 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-214ENST00000554604 FKBP11Q9NYL4 201 aa9.73□□□□□ -0.85
SHMT2-214ENST00000554604 C9JQL5 133 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 H7C2Y5 167 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 NBR2O15453 112 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 KBTBD11O94819 623 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 SNAPINO95295 136 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 IFNA10P01566 189 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 MC5RP33032 325 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 HOXA1P49639 335 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-214ENST00000554604 ATP5IP56385 69 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-214ENST00000554604 RAB11AP62491 216 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 DLK1P80370 383 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 FOXE3Q13461 319 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 ATRAIDQ6UW56 229 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 C8orf86Q6ZUL3 223 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 OR4A5Q8NH83 315 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 ENY2Q9NPA8 101 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 RPRMQ9NS64 109 aa9.72□□□□□ -0.85
SHMT2-214ENST00000554604 SRRM4A7MD48 611 aaKnown RBP9.71□□□□□ -0.86
SHMT2-214ENST00000554604 PRSS46E5RG02 174 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 C17orf112F2Z3M2 114 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 MPDU1O75352 247 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 MBP02144 154 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 IGKV1-16P04430 117 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 RPLP1P05386 114 aaKnown RBP9.71□□□□□ -0.86
SHMT2-214ENST00000554604 ELANEP08246 267 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 FGF7P21781 194 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 CNTFRP26992 372 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 PRCDQ00LT1 54 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 PLGLAQ15195 96 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 GUCA2BQ16661 112 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 C5orf64Q2M2E5 130 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 ETV3LQ6ZN32 361 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 C18orf65Q6ZTR6 163 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 MRPL41Q8IXM3 137 aaKnown RBP9.71□□□□□ -0.86
SHMT2-214ENST00000554604 LINC00482Q8N8I6 264 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 OR5B3Q8NH48 314 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 VSTM2AQ8TAG5 236 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 FLYWCH2Q96CP2 140 aaKnown RBP9.71□□□□□ -0.86
SHMT2-214ENST00000554604 EIF5A2Q9GZV4 153 aaKnown RBP9.71□□□□□ -0.86
SHMT2-214ENST00000554604 WDR83OSQ9Y284 106 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 WASHC3Q9Y3C0 194 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 OR51B2Q9Y5P1 312 aa9.71□□□□□ -0.86
SHMT2-214ENST00000554604 RBFOX3A6NFN3 312 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 FNDC10F2Z333 226 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 INS-IGF2F8WCM5 200 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 IGHG4P01861 327 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 HLA-DRB1P01911 266 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 IGF1P05019 195 aa9.7□□□□□ -0.86
SHMT2-214ENST00000554604 SAA1P0DJI8 122 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms