RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 FAM90A26D6RGX4 464 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 K7EPK0 472 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 ATP6V0E1O15342 81 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 TSPAN9O75954 239 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 CNIH1O95406 144 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 IFNA17P01571 189 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 GIPP09681 153 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-212ENST00000554486 TRAPPC2P0DI81 140 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 TRAPPC2BP0DI82 140 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 NKX2-1P43699 371 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-212ENST00000554486 VDAC2P45880 294 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-212ENST00000554486 CRIP2P52943 208 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-212ENST00000554486 SPCS3P61009 180 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 POLR2GP62487 172 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCFD1-212ENST00000554486 PRCDQ00LT1 54 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 C9orf152Q5JTZ5 239 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 SLC35E3Q7Z769 313 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 LURAP1LQ8IV03 231 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 OR10W1Q8NGF6 305 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 OR5B3Q8NH48 314 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 OR52E5Q8NH55 327 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 ARPC1AQ92747 370 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 ST6GAL2Q96JF0 529 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 FAM103A1Q9BTL3 118 aaKnown RBP4.91□□□□□ -1.62
SCFD1-212ENST00000554486 PDCD10Q9BUL8 212 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 HINT2Q9BX68 163 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 NMES1Q9C002 83 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 COMMD5Q9GZQ3 224 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 MAGT1Q9H0U3 335 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 RBKSQ9H477 322 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 C11orf1Q9H5F2 150 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 RANGRFQ9HD47 186 aaPredicted RBP4.91□□□□□ -1.62
SCFD1-212ENST00000554486 PARP11Q9NR21 331 aa4.91□□□□□ -1.62
SCFD1-212ENST00000554486 RCL1Q9Y2P8 373 aaKnown RBP4.91□□□□□ -1.62
SCFD1-212ENST00000554486 FBN1P35555 2871 aaKnown RBP4.9□□□□□ -1.62
SCFD1-212ENST00000554486 TRAV14DV4A0A0A6YYC5 116 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 INS-IGF2F8WCM5 200 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 G3V318 75 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 G3V3Q6 166 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 TRIM77I1YAP6 450 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 KCNAB3O43448 404 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 TMEM50AO95807 157 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 IGF1P05019 195 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 APELAP0DMC3 54 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 IAPPP10997 89 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 AREGP15514 252 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 CYCSP99999 105 aaKnown RBP4.9□□□□□ -1.63
SCFD1-212ENST00000554486 WT1-ASQ06250 92 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 CD300CQ08708 224 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 Q5BKY6 102 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 HIST2H2BDQ6DRA6 164 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 C19orf35Q6ZS72 473 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 LFNGQ8NES3 379 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 SGMS2Q8NHU3 365 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 PPP1R1CQ8WVI7 109 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 NOL4LQ96MY1 436 aaPredicted RBP4.9□□□□□ -1.63
SCFD1-212ENST00000554486 SRSF8Q9BRL6 282 aaKnown RBP4.9□□□□□ -1.63
SCFD1-212ENST00000554486 RNF126Q9BV68 326 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 PLEKHA3Q9HB20 300 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 LINC00527Q9UJ94 153 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 LSM5Q9Y4Y9 91 aaKnown RBP4.9□□□□□ -1.63
SCFD1-212ENST00000554486 WSB1Q9Y6I7 421 aa4.9□□□□□ -1.63
SCFD1-212ENST00000554486 TRAV41A0A0B4J266 112 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 A0A1W2PN81 502 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 CEBPZOSA8MTT3 80 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 SMLR1H3BR10 107 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 WRBO00258 174 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 SYNGR2O43760 224 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 SSSCA1O60232 199 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 SOX15O60248 233 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 MED6O75586 246 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 DEDDO75618 318 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 CCNKO75909 580 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 NDUFA7O95182 113 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 MPC2O95563 127 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 REG1AP05451 166 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 CRYBA1P05813 215 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 OR13C7P0DN81 318 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 RNASE2P10153 161 aaKnown RBP4.89□□□□□ -1.63
SCFD1-212ENST00000554486 CTRB1P17538 263 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 PSMB6P28072 239 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 CHRNA7P36544 502 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 HOXA1P49639 335 aaPredicted RBP4.89□□□□□ -1.63
SCFD1-212ENST00000554486 MFAP2P55001 183 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 PAX9P55771 341 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 S100A10P60903 97 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 ECSCRQ19T08 205 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 LRRC37A5PQ49AS3 106 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 CTRB2Q6GPI1 263 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 UNQ5815/PRO19632Q6UWF5 114 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 STPG2Q8N412 459 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 OR5T1Q8NG75 326 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 DTD1Q8TEA8 209 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 ASB13Q8WXK3 278 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 NEURL2Q9BR09 285 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 C16orf95Q9H693 158 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 OR5AC2Q9NZP5 309 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 CACFD1Q9UGQ2 172 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 ZNF580Q9UK33 172 aa4.89□□□□□ -1.63
SCFD1-212ENST00000554486 TENM1Q9UKZ4 2725 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms